Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdh4P39038 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdh4P39038 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.6□□□□□ -0.07
Cdh4P39038 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdh4P39038 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cdh4P39038 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdh4P39038 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Cdh4P39038 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.6□□□□□ -0.07
Cdh4P39038 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdh4P39038 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdh4P39038 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Cdh4P39038 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
Cdh4P39038 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdh4P39038 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.6□□□□□ -0.07
Cdh4P39038 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdh4P39038 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdh4P39038 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Cdh4P39038 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdh4P39038 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdh4P39038 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdh4P39038 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdh4P39038 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdh4P39038 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Cdh4P39038 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdh4P39038 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdh4P39038 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cdh4P39038 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.59□□□□□ -0.07
Cdh4P39038 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdh4P39038 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdh4P39038 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdh4P39038 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdh4P39038 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdh4P39038 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.59□□□□□ -0.07
Cdh4P39038 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cdh4P39038 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cdh4P39038 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Cdh4P39038 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.59□□□□□ -0.07
Cdh4P39038 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.59□□□□□ -0.07
Cdh4P39038 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Cdh4P39038 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdh4P39038 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdh4P39038 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cdh4P39038 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdh4P39038 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdh4P39038 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdh4P39038 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdh4P39038 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdh4P39038 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdh4P39038 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdh4P39038 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdh4P39038 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdh4P39038 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdh4P39038 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
Cdh4P39038 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.07
Cdh4P39038 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cdh4P39038 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cdh4P39038 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh4P39038 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh4P39038 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh4P39038 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh4P39038 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.58□□□□□ -0.08
Cdh4P39038 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.58□□□□□ -0.08
Cdh4P39038 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh4P39038 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.58□□□□□ -0.08
Cdh4P39038 Psmb5-202ENSMUST00000227257 622 ntBASIC14.58□□□□□ -0.08
Cdh4P39038 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh4P39038 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Cdh4P39038 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh4P39038 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh4P39038 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Cdh4P39038 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Cdh4P39038 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh4P39038 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Cdh4P39038 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh4P39038 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Cdh4P39038 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh4P39038 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh4P39038 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh4P39038 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh4P39038 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.58□□□□□ -0.08
Cdh4P39038 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh4P39038 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.58□□□□□ -0.08
Cdh4P39038 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh4P39038 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh4P39038 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdh4P39038 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdh4P39038 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdh4P39038 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdh4P39038 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdh4P39038 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.57□□□□□ -0.08
Cdh4P39038 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdh4P39038 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.57□□□□□ -0.08
Cdh4P39038 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdh4P39038 Gm4899-201ENSMUST00000178708 719 ntBASIC14.57□□□□□ -0.08
Cdh4P39038 Gm43514-201ENSMUST00000198852 424 ntBASIC14.57□□□□□ -0.08
Cdh4P39038 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.57□□□□□ -0.08
Cdh4P39038 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdh4P39038 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Cdh4P39038 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.57□□□□□ -0.08
Cdh4P39038 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms