Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sftpa1P35242 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sftpa1P35242 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Sftpa1P35242 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.06□□□□□ -0.16
Sftpa1P35242 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Sftpa1P35242 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.06□□□□□ -0.16
Sftpa1P35242 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.06□□□□□ -0.16
Sftpa1P35242 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sftpa1P35242 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sftpa1P35242 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sftpa1P35242 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sftpa1P35242 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.05□□□□□ -0.16
Sftpa1P35242 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.05□□□□□ -0.16
Sftpa1P35242 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sftpa1P35242 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sftpa1P35242 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Sftpa1P35242 Gm11543-201ENSMUST00000120758 370 ntBASIC14.05□□□□□ -0.16
Sftpa1P35242 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.05□□□□□ -0.16
Sftpa1P35242 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC14.05□□□□□ -0.16
Sftpa1P35242 Gm38225-201ENSMUST00000194001 393 ntBASIC14.05□□□□□ -0.16
Sftpa1P35242 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Sftpa1P35242 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sftpa1P35242 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sftpa1P35242 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.05□□□□□ -0.16
Sftpa1P35242 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sftpa1P35242 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC14.05□□□□□ -0.16
Sftpa1P35242 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.05□□□□□ -0.16
Sftpa1P35242 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.05□□□□□ -0.16
Sftpa1P35242 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Sftpa1P35242 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sftpa1P35242 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.05□□□□□ -0.16
Sftpa1P35242 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sftpa1P35242 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sftpa1P35242 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sftpa1P35242 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.04□□□□□ -0.16
Sftpa1P35242 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sftpa1P35242 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sftpa1P35242 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sftpa1P35242 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sftpa1P35242 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sftpa1P35242 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sftpa1P35242 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Sftpa1P35242 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Sftpa1P35242 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sftpa1P35242 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sftpa1P35242 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.04□□□□□ -0.16
Sftpa1P35242 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.04□□□□□ -0.16
Sftpa1P35242 Gm15483-201ENSMUST00000120338 456 ntBASIC14.04□□□□□ -0.16
Sftpa1P35242 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sftpa1P35242 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Sftpa1P35242 Gm6473-201ENSMUST00000188572 1210 ntBASIC14.04□□□□□ -0.16
Sftpa1P35242 Gm29541-201ENSMUST00000191351 678 ntBASIC14.04□□□□□ -0.16
Sftpa1P35242 Gm7730-201ENSMUST00000212486 454 ntBASIC14.04□□□□□ -0.16
Sftpa1P35242 Gm7653-201ENSMUST00000214567 508 ntBASIC14.04□□□□□ -0.16
Sftpa1P35242 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.04□□□□□ -0.16
Sftpa1P35242 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sftpa1P35242 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.04□□□□□ -0.16
Sftpa1P35242 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Sftpa1P35242 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sftpa1P35242 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sftpa1P35242 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.04□□□□□ -0.16
Sftpa1P35242 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sftpa1P35242 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.04□□□□□ -0.16
Sftpa1P35242 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sftpa1P35242 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sftpa1P35242 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sftpa1P35242 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.03□□□□□ -0.16
Sftpa1P35242 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sftpa1P35242 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sftpa1P35242 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Sftpa1P35242 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sftpa1P35242 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Sftpa1P35242 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.03□□□□□ -0.16
Sftpa1P35242 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Sftpa1P35242 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sftpa1P35242 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Sftpa1P35242 Gm13015-201ENSMUST00000118674 204 ntBASIC14.03□□□□□ -0.16
Sftpa1P35242 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sftpa1P35242 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sftpa1P35242 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.03□□□□□ -0.16
Sftpa1P35242 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sftpa1P35242 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Sftpa1P35242 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC14.03□□□□□ -0.16
Sftpa1P35242 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Sftpa1P35242 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sftpa1P35242 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sftpa1P35242 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sftpa1P35242 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sftpa1P35242 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sftpa1P35242 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sftpa1P35242 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sftpa1P35242 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sftpa1P35242 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sftpa1P35242 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.03□□□□□ -0.16
Sftpa1P35242 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sftpa1P35242 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sftpa1P35242 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sftpa1P35242 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sftpa1P35242 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Sftpa1P35242 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms