Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rom1P32958 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC12.08□□□□□ -0.48
Rom1P32958 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC12.08□□□□□ -0.48
Rom1P32958 Mir5122-201ENSMUST00000175004 89 ntBASIC12.08□□□□□ -0.48
Rom1P32958 Gm20760-201ENSMUST00000179197 648 ntBASIC12.08□□□□□ -0.48
Rom1P32958 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC12.08□□□□□ -0.48
Rom1P32958 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rom1P32958 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Rom1P32958 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC12.08□□□□□ -0.48
Rom1P32958 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rom1P32958 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rom1P32958 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rom1P32958 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rom1P32958 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rom1P32958 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rom1P32958 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rom1P32958 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rom1P32958 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rom1P32958 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rom1P32958 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rom1P32958 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rom1P32958 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rom1P32958 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rom1P32958 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rom1P32958 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rom1P32958 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rom1P32958 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rom1P32958 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Rom1P32958 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.07□□□□□ -0.48
Rom1P32958 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC12.07□□□□□ -0.48
Rom1P32958 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rom1P32958 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rom1P32958 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rom1P32958 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Rom1P32958 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rom1P32958 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rom1P32958 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rom1P32958 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rom1P32958 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rom1P32958 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rom1P32958 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC12.07□□□□□ -0.48
Rom1P32958 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC12.07□□□□□ -0.48
Rom1P32958 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC12.07□□□□□ -0.48
Rom1P32958 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.07□□□□□ -0.48
Rom1P32958 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rom1P32958 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rom1P32958 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC12.07□□□□□ -0.48
Rom1P32958 AC164629.5-201ENSMUST00000220387 632 ntBASIC12.07□□□□□ -0.48
Rom1P32958 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rom1P32958 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rom1P32958 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rom1P32958 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Rom1P32958 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rom1P32958 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rom1P32958 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.07□□□□□ -0.48
Rom1P32958 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rom1P32958 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rom1P32958 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rom1P32958 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Rom1P32958 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.07□□□□□ -0.48
Rom1P32958 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC12.07□□□□□ -0.48
Rom1P32958 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.07□□□□□ -0.48
Rom1P32958 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rom1P32958 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rom1P32958 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rom1P32958 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rom1P32958 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Rom1P32958 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rom1P32958 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Rom1P32958 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rom1P32958 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rom1P32958 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Rom1P32958 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rom1P32958 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rom1P32958 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rom1P32958 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rom1P32958 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rom1P32958 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rom1P32958 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC12.06□□□□□ -0.48
Rom1P32958 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rom1P32958 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rom1P32958 Gm9987-201ENSMUST00000069768 567 ntBASIC12.06□□□□□ -0.48
Rom1P32958 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rom1P32958 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.06□□□□□ -0.48
Rom1P32958 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rom1P32958 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Rom1P32958 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rom1P32958 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.06□□□□□ -0.48
Rom1P32958 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Rom1P32958 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rom1P32958 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.06□□□□□ -0.48
Rom1P32958 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rom1P32958 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rom1P32958 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Rom1P32958 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.05□□□□□ -0.48
Rom1P32958 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rom1P32958 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Rom1P32958 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Rom1P32958 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rom1P32958 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms