Protein–RNA interactions for Protein: P29788

Vtn, Vitronectin, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VtnP29788 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VtnP29788 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
VtnP29788 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VtnP29788 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
VtnP29788 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.82□□□□□ -0.2
VtnP29788 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VtnP29788 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VtnP29788 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VtnP29788 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VtnP29788 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
VtnP29788 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VtnP29788 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.82□□□□□ -0.2
VtnP29788 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
VtnP29788 Gm8318-201ENSMUST00000182954 872 ntBASIC13.82□□□□□ -0.2
VtnP29788 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.82□□□□□ -0.2
VtnP29788 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.82□□□□□ -0.2
VtnP29788 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VtnP29788 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VtnP29788 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.82□□□□□ -0.2
VtnP29788 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VtnP29788 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
VtnP29788 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VtnP29788 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
VtnP29788 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VtnP29788 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
VtnP29788 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VtnP29788 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC13.82□□□□□ -0.2
VtnP29788 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VtnP29788 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.82□□□□□ -0.2
VtnP29788 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.82□□□□□ -0.2
VtnP29788 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
VtnP29788 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VtnP29788 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VtnP29788 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VtnP29788 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VtnP29788 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
VtnP29788 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VtnP29788 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
VtnP29788 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VtnP29788 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VtnP29788 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
VtnP29788 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
VtnP29788 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
VtnP29788 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VtnP29788 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
VtnP29788 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VtnP29788 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
VtnP29788 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC13.81□□□□□ -0.2
VtnP29788 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
VtnP29788 Gm18489-201ENSMUST00000172565 551 ntBASIC13.81□□□□□ -0.2
VtnP29788 Gm27702-201ENSMUST00000184512 56 ntBASIC13.81□□□□□ -0.2
VtnP29788 Gm2213-201ENSMUST00000197485 688 ntBASIC13.81□□□□□ -0.2
VtnP29788 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.81□□□□□ -0.2
VtnP29788 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.81□□□□□ -0.2
VtnP29788 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
VtnP29788 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VtnP29788 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VtnP29788 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
VtnP29788 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
VtnP29788 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
VtnP29788 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VtnP29788 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
VtnP29788 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
VtnP29788 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
VtnP29788 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VtnP29788 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
VtnP29788 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
VtnP29788 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
VtnP29788 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.81□□□□□ -0.2
VtnP29788 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VtnP29788 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VtnP29788 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VtnP29788 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VtnP29788 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VtnP29788 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
VtnP29788 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VtnP29788 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
VtnP29788 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VtnP29788 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VtnP29788 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
VtnP29788 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.8□□□□□ -0.2
VtnP29788 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VtnP29788 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
VtnP29788 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
VtnP29788 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
VtnP29788 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VtnP29788 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VtnP29788 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VtnP29788 Gm9727-201ENSMUST00000161387 555 ntBASIC13.8□□□□□ -0.2
VtnP29788 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
VtnP29788 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC13.8□□□□□ -0.2
VtnP29788 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.8□□□□□ -0.2
VtnP29788 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VtnP29788 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VtnP29788 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.8□□□□□ -0.2
VtnP29788 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.8□□□□□ -0.2
VtnP29788 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VtnP29788 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
VtnP29788 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
VtnP29788 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms