Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vcam1P29533 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.47■□□□□ 0.39
Vcam1P29533 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Vcam1P29533 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Vcam1P29533 Prob1-201ENSMUST00000097619 3021 ntBASIC17.46■□□□□ 0.39
Vcam1P29533 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vcam1P29533 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Vcam1P29533 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vcam1P29533 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vcam1P29533 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vcam1P29533 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Vcam1P29533 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Vcam1P29533 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Vcam1P29533 Gm38225-201ENSMUST00000194001 393 ntBASIC17.46■□□□□ 0.39
Vcam1P29533 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vcam1P29533 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vcam1P29533 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
Vcam1P29533 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vcam1P29533 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vcam1P29533 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Vcam1P29533 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vcam1P29533 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC17.46■□□□□ 0.39
Vcam1P29533 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vcam1P29533 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vcam1P29533 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Vcam1P29533 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Vcam1P29533 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Vcam1P29533 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vcam1P29533 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Vcam1P29533 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vcam1P29533 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC17.45■□□□□ 0.38
Vcam1P29533 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Vcam1P29533 Gm13223-201ENSMUST00000118609 747 ntBASIC17.45■□□□□ 0.38
Vcam1P29533 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC17.45■□□□□ 0.38
Vcam1P29533 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC17.45■□□□□ 0.38
Vcam1P29533 Gm27618-201ENSMUST00000183671 60 ntBASIC17.45■□□□□ 0.38
Vcam1P29533 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Vcam1P29533 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Vcam1P29533 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC17.45■□□□□ 0.38
Vcam1P29533 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vcam1P29533 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vcam1P29533 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Vcam1P29533 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Vcam1P29533 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Vcam1P29533 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Vcam1P29533 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vcam1P29533 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Vcam1P29533 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC17.44■□□□□ 0.38
Vcam1P29533 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.44■□□□□ 0.38
Vcam1P29533 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC17.44■□□□□ 0.38
Vcam1P29533 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Vcam1P29533 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Vcam1P29533 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vcam1P29533 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vcam1P29533 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vcam1P29533 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Vcam1P29533 Gm6415-201ENSMUST00000118488 348 ntBASIC17.44■□□□□ 0.38
Vcam1P29533 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Vcam1P29533 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC17.44■□□□□ 0.38
Vcam1P29533 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vcam1P29533 Gm9824-201ENSMUST00000178707 561 ntBASIC17.44■□□□□ 0.38
Vcam1P29533 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC17.44■□□□□ 0.38
Vcam1P29533 Gm38294-201ENSMUST00000192831 381 ntBASIC17.44■□□□□ 0.38
Vcam1P29533 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC17.44■□□□□ 0.38
Vcam1P29533 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC17.44■□□□□ 0.38
Vcam1P29533 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vcam1P29533 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vcam1P29533 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Vcam1P29533 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vcam1P29533 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC17.44■□□□□ 0.38
Vcam1P29533 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Vcam1P29533 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Vcam1P29533 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vcam1P29533 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vcam1P29533 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Vcam1P29533 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vcam1P29533 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Vcam1P29533 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vcam1P29533 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Vcam1P29533 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC17.43■□□□□ 0.38
Vcam1P29533 Gm8116-201ENSMUST00000182917 1201 ntBASIC17.43■□□□□ 0.38
Vcam1P29533 Gm27321-201ENSMUST00000185021 205 ntBASIC17.43■□□□□ 0.38
Vcam1P29533 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC17.43■□□□□ 0.38
Vcam1P29533 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vcam1P29533 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vcam1P29533 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vcam1P29533 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vcam1P29533 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vcam1P29533 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vcam1P29533 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vcam1P29533 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vcam1P29533 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Vcam1P29533 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Vcam1P29533 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.42■□□□□ 0.38
Vcam1P29533 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC17.42■□□□□ 0.38
Vcam1P29533 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vcam1P29533 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Vcam1P29533 Gm5049-201ENSMUST00000195878 1590 ntBASIC17.42■□□□□ 0.38
Vcam1P29533 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC17.42■□□□□ 0.38
Vcam1P29533 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms