Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Mmp3P28862 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.26■□□□□ 0.19
Mmp3P28862 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Mmp3P28862 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Mmp3P28862 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Mmp3P28862 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Mmp3P28862 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Mmp3P28862 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Mmp3P28862 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Mmp3P28862 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Mmp3P28862 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Mmp3P28862 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Mmp3P28862 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Mmp3P28862 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Mmp3P28862 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Mmp3P28862 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Mmp3P28862 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
Mmp3P28862 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Mmp3P28862 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Mmp3P28862 Gm22065-201ENSMUST00000103753 110 ntBASIC16.25■□□□□ 0.19
Mmp3P28862 Gm22066-201ENSMUST00000103761 110 ntBASIC16.25■□□□□ 0.19
Mmp3P28862 Gm24932-201ENSMUST00000103763 110 ntBASIC16.25■□□□□ 0.19
Mmp3P28862 Gm24115-201ENSMUST00000103799 110 ntBASIC16.25■□□□□ 0.19
Mmp3P28862 Gm22190-201ENSMUST00000103827 110 ntBASIC16.25■□□□□ 0.19
Mmp3P28862 Gm22191-201ENSMUST00000103831 110 ntBASIC16.25■□□□□ 0.19
Mmp3P28862 Gm24721-201ENSMUST00000103849 110 ntBASIC16.25■□□□□ 0.19
Mmp3P28862 Gm28018-201ENSMUST00000103869 110 ntBASIC16.25■□□□□ 0.19
Mmp3P28862 Gm26399-201ENSMUST00000103937 110 ntBASIC16.25■□□□□ 0.19
Mmp3P28862 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Mmp3P28862 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Mmp3P28862 Gm25349-201ENSMUST00000177728 110 ntBASIC16.25■□□□□ 0.19
Mmp3P28862 Gm23616-201ENSMUST00000177797 110 ntBASIC16.25■□□□□ 0.19
Mmp3P28862 Gm25871-201ENSMUST00000177816 110 ntBASIC16.25■□□□□ 0.19
Mmp3P28862 Gm24752-201ENSMUST00000178240 110 ntBASIC16.25■□□□□ 0.19
Mmp3P28862 Gm24496-201ENSMUST00000178287 110 ntBASIC16.25■□□□□ 0.19
Mmp3P28862 Gm25649-201ENSMUST00000178476 110 ntBASIC16.25■□□□□ 0.19
Mmp3P28862 Gm25548-201ENSMUST00000178681 110 ntBASIC16.25■□□□□ 0.19
Mmp3P28862 Gm23147-201ENSMUST00000178841 110 ntBASIC16.25■□□□□ 0.19
Mmp3P28862 Gm26095-201ENSMUST00000179270 110 ntBASIC16.25■□□□□ 0.19
Mmp3P28862 Gm22171-201ENSMUST00000179283 110 ntBASIC16.25■□□□□ 0.19
Mmp3P28862 Gm23936-201ENSMUST00000179354 110 ntBASIC16.25■□□□□ 0.19
Mmp3P28862 Gm22619-201ENSMUST00000179516 110 ntBASIC16.25■□□□□ 0.19
Mmp3P28862 Gm25255-201ENSMUST00000179579 110 ntBASIC16.25■□□□□ 0.19
Mmp3P28862 Gm24755-201ENSMUST00000179691 110 ntBASIC16.25■□□□□ 0.19
Mmp3P28862 Gm26506-201ENSMUST00000179692 110 ntBASIC16.25■□□□□ 0.19
Mmp3P28862 Gm25086-201ENSMUST00000179931 110 ntBASIC16.25■□□□□ 0.19
Mmp3P28862 Gm23243-201ENSMUST00000180047 110 ntBASIC16.25■□□□□ 0.19
Mmp3P28862 Gm24659-201ENSMUST00000180212 110 ntBASIC16.25■□□□□ 0.19
Mmp3P28862 Gm24169-201ENSMUST00000180244 110 ntBASIC16.25■□□□□ 0.19
Mmp3P28862 Gm23689-201ENSMUST00000180354 110 ntBASIC16.25■□□□□ 0.19
Mmp3P28862 Gm27359-201ENSMUST00000184153 110 ntBASIC16.25■□□□□ 0.19
Mmp3P28862 Gm27785-201ENSMUST00000184268 110 ntBASIC16.25■□□□□ 0.19
Mmp3P28862 Gm27466-201ENSMUST00000184396 110 ntBASIC16.25■□□□□ 0.19
Mmp3P28862 Gm27703-201ENSMUST00000184836 110 ntBASIC16.25■□□□□ 0.19
Mmp3P28862 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Mmp3P28862 AC164567.1-201ENSMUST00000219185 960 ntBASIC16.25■□□□□ 0.19
Mmp3P28862 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Mmp3P28862 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Mmp3P28862 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Mmp3P28862 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Mmp3P28862 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Mmp3P28862 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Mmp3P28862 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.25■□□□□ 0.19
Mmp3P28862 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Mmp3P28862 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
Mmp3P28862 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp3P28862 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp3P28862 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC16.24■□□□□ 0.19
Mmp3P28862 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp3P28862 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp3P28862 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp3P28862 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp3P28862 Fgf17-202ENSMUST00000227123 1336 ntBASIC16.24■□□□□ 0.19
Mmp3P28862 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp3P28862 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp3P28862 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp3P28862 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp3P28862 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp3P28862 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp3P28862 Mir449b-201ENSMUST00000104833 80 ntBASIC16.24■□□□□ 0.19
Mmp3P28862 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Mmp3P28862 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Mmp3P28862 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC16.24■□□□□ 0.19
Mmp3P28862 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp3P28862 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC16.24■□□□□ 0.19
Mmp3P28862 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp3P28862 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Mmp3P28862 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC16.24■□□□□ 0.19
Mmp3P28862 AA543401-201ENSMUST00000164248 1269 ntBASIC16.24■□□□□ 0.19
Mmp3P28862 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp3P28862 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp3P28862 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp3P28862 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp3P28862 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp3P28862 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp3P28862 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp3P28862 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Mmp3P28862 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp3P28862 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Mmp3P28862 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms