Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col8a2P25318 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Col8a2P25318 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.73□□□□□ -0.37
Col8a2P25318 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col8a2P25318 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col8a2P25318 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col8a2P25318 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Col8a2P25318 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Col8a2P25318 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Col8a2P25318 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.73□□□□□ -0.37
Col8a2P25318 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col8a2P25318 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Col8a2P25318 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col8a2P25318 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Col8a2P25318 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Col8a2P25318 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col8a2P25318 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
Col8a2P25318 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col8a2P25318 AC025913.2-201ENSMUST00000220136 1766 ntBASIC12.72□□□□□ -0.37
Col8a2P25318 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col8a2P25318 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col8a2P25318 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col8a2P25318 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col8a2P25318 Gm4913-201ENSMUST00000117075 1290 ntBASIC12.72□□□□□ -0.37
Col8a2P25318 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.72□□□□□ -0.37
Col8a2P25318 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.72□□□□□ -0.37
Col8a2P25318 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col8a2P25318 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col8a2P25318 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC12.72□□□□□ -0.37
Col8a2P25318 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col8a2P25318 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.72□□□□□ -0.37
Col8a2P25318 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col8a2P25318 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col8a2P25318 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col8a2P25318 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col8a2P25318 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col8a2P25318 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.72□□□□□ -0.37
Col8a2P25318 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col8a2P25318 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col8a2P25318 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col8a2P25318 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col8a2P25318 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col8a2P25318 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col8a2P25318 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Col8a2P25318 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col8a2P25318 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC12.71□□□□□ -0.37
Col8a2P25318 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col8a2P25318 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col8a2P25318 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col8a2P25318 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col8a2P25318 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col8a2P25318 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Col8a2P25318 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col8a2P25318 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col8a2P25318 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Col8a2P25318 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Col8a2P25318 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col8a2P25318 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.71□□□□□ -0.37
Col8a2P25318 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Col8a2P25318 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC12.71□□□□□ -0.37
Col8a2P25318 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Col8a2P25318 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Col8a2P25318 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Col8a2P25318 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Col8a2P25318 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col8a2P25318 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col8a2P25318 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Col8a2P25318 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Col8a2P25318 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col8a2P25318 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col8a2P25318 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col8a2P25318 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col8a2P25318 Gm45293-201ENSMUST00000209754 1812 ntBASIC12.71□□□□□ -0.38
Col8a2P25318 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Col8a2P25318 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col8a2P25318 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col8a2P25318 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col8a2P25318 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Col8a2P25318 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col8a2P25318 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col8a2P25318 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col8a2P25318 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col8a2P25318 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col8a2P25318 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col8a2P25318 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Col8a2P25318 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col8a2P25318 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.7□□□□□ -0.38
Col8a2P25318 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col8a2P25318 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col8a2P25318 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Col8a2P25318 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Col8a2P25318 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col8a2P25318 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col8a2P25318 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Col8a2P25318 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Col8a2P25318 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col8a2P25318 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col8a2P25318 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col8a2P25318 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC12.7□□□□□ -0.38
Col8a2P25318 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms