Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf1aP25118 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf1aP25118 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf1aP25118 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf1aP25118 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Tnfrsf1aP25118 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.8□□□□□ -0.36
Tnfrsf1aP25118 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf1aP25118 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf1aP25118 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf1aP25118 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf1aP25118 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.8□□□□□ -0.36
Tnfrsf1aP25118 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf1aP25118 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf1aP25118 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Tnfrsf1aP25118 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf1aP25118 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.79□□□□□ -0.36
Tnfrsf1aP25118 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf1aP25118 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf1aP25118 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf1aP25118 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf1aP25118 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf1aP25118 Gm14722-201ENSMUST00000118943 689 ntBASIC12.79□□□□□ -0.36
Tnfrsf1aP25118 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC12.79□□□□□ -0.36
Tnfrsf1aP25118 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC12.79□□□□□ -0.36
Tnfrsf1aP25118 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf1aP25118 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC12.79□□□□□ -0.36
Tnfrsf1aP25118 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Tnfrsf1aP25118 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf1aP25118 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf1aP25118 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf1aP25118 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Tnfrsf1aP25118 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf1aP25118 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.79□□□□□ -0.36
Tnfrsf1aP25118 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf1aP25118 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf1aP25118 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf1aP25118 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Tnfrsf1aP25118 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf1aP25118 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf1aP25118 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Tnfrsf1aP25118 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf1aP25118 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf1aP25118 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf1aP25118 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Tnfrsf1aP25118 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC12.78□□□□□ -0.36
Tnfrsf1aP25118 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC12.78□□□□□ -0.36
Tnfrsf1aP25118 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Tnfrsf1aP25118 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf1aP25118 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf1aP25118 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Tnfrsf1aP25118 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf1aP25118 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf1aP25118 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Tnfrsf1aP25118 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf1aP25118 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf1aP25118 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf1aP25118 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf1aP25118 Grk6-207ENSMUST00000225925 2769 ntBASIC12.78□□□□□ -0.36
Tnfrsf1aP25118 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf1aP25118 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Tnfrsf1aP25118 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf1aP25118 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf1aP25118 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf1aP25118 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf1aP25118 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf1aP25118 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf1aP25118 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf1aP25118 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf1aP25118 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Tnfrsf1aP25118 Gm9867-201ENSMUST00000192212 2647 ntBASIC12.77□□□□□ -0.36
Tnfrsf1aP25118 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfrsf1aP25118 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfrsf1aP25118 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfrsf1aP25118 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfrsf1aP25118 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
Tnfrsf1aP25118 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfrsf1aP25118 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfrsf1aP25118 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfrsf1aP25118 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.77□□□□□ -0.36
Tnfrsf1aP25118 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfrsf1aP25118 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfrsf1aP25118 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfrsf1aP25118 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Tnfrsf1aP25118 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfrsf1aP25118 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC12.77□□□□□ -0.37
Tnfrsf1aP25118 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.77□□□□□ -0.37
Tnfrsf1aP25118 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfrsf1aP25118 Gm7286-201ENSMUST00000182691 1007 ntBASIC12.77□□□□□ -0.37
Tnfrsf1aP25118 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Tnfrsf1aP25118 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC12.77□□□□□ -0.37
Tnfrsf1aP25118 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC12.77□□□□□ -0.37
Tnfrsf1aP25118 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.77□□□□□ -0.37
Tnfrsf1aP25118 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
Tnfrsf1aP25118 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfrsf1aP25118 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfrsf1aP25118 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Tnfrsf1aP25118 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfrsf1aP25118 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.77□□□□□ -0.37
Tnfrsf1aP25118 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfrsf1aP25118 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms