Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TP20293 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TP20293 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.39□□□□□ -0.11
TP20293 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TP20293 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
TP20293 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.38□□□□□ -0.11
TP20293 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
TP20293 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TP20293 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TP20293 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TP20293 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TP20293 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TP20293 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TP20293 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
TP20293 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TP20293 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TP20293 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
TP20293 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TP20293 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TP20293 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
TP20293 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.38□□□□□ -0.11
TP20293 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.38□□□□□ -0.11
TP20293 Gm11780-201ENSMUST00000136880 516 ntBASIC14.38□□□□□ -0.11
TP20293 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.38□□□□□ -0.11
TP20293 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
TP20293 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TP20293 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TP20293 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TP20293 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TP20293 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TP20293 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.38□□□□□ -0.11
TP20293 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
TP20293 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TP20293 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TP20293 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TP20293 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TP20293 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TP20293 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TP20293 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TP20293 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TP20293 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TP20293 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TP20293 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TP20293 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TP20293 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.37□□□□□ -0.11
TP20293 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TP20293 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TP20293 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.37□□□□□ -0.11
TP20293 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TP20293 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TP20293 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TP20293 App-207ENSMUST00000227737 2827 ntBASIC14.37□□□□□ -0.11
TP20293 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TP20293 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TP20293 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.37□□□□□ -0.11
TP20293 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.37□□□□□ -0.11
TP20293 Mir8098-201ENSMUST00000184011 137 ntBASIC14.37□□□□□ -0.11
TP20293 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TP20293 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.37□□□□□ -0.11
TP20293 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TP20293 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TP20293 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TP20293 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TP20293 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TP20293 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.37□□□□□ -0.11
TP20293 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TP20293 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TP20293 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TP20293 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TP20293 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TP20293 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TP20293 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.37□□□□□ -0.11
TP20293 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TP20293 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TP20293 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TP20293 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
TP20293 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TP20293 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TP20293 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TP20293 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TP20293 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TP20293 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.36□□□□□ -0.11
TP20293 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
TP20293 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
TP20293 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TP20293 Gm27741-201ENSMUST00000185060 237 ntBASIC14.36□□□□□ -0.11
TP20293 Gm28659-201ENSMUST00000188013 759 ntBASIC14.36□□□□□ -0.11
TP20293 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TP20293 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.36□□□□□ -0.11
TP20293 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TP20293 Gm6376-201ENSMUST00000209407 580 ntBASIC14.36□□□□□ -0.11
TP20293 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TP20293 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TP20293 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TP20293 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TP20293 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TP20293 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TP20293 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
TP20293 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TP20293 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms