Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cntn1P12960 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cntn1P12960 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cntn1P12960 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cntn1P12960 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cntn1P12960 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.63□□□□□ -0.07
Cntn1P12960 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cntn1P12960 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cntn1P12960 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cntn1P12960 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
Cntn1P12960 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cntn1P12960 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Cntn1P12960 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.62□□□□□ -0.07
Cntn1P12960 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cntn1P12960 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cntn1P12960 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Cntn1P12960 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cntn1P12960 Gm14822-201ENSMUST00000122247 291 ntBASIC14.62□□□□□ -0.07
Cntn1P12960 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.62□□□□□ -0.07
Cntn1P12960 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cntn1P12960 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Cntn1P12960 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cntn1P12960 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cntn1P12960 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.62□□□□□ -0.07
Cntn1P12960 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cntn1P12960 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.62□□□□□ -0.07
Cntn1P12960 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cntn1P12960 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cntn1P12960 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cntn1P12960 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Cntn1P12960 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cntn1P12960 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cntn1P12960 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cntn1P12960 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.61□□□□□ -0.07
Cntn1P12960 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cntn1P12960 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.61□□□□□ -0.07
Cntn1P12960 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
Cntn1P12960 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.61□□□□□ -0.07
Cntn1P12960 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cntn1P12960 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cntn1P12960 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.61□□□□□ -0.07
Cntn1P12960 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.61□□□□□ -0.07
Cntn1P12960 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.61□□□□□ -0.07
Cntn1P12960 Gm24513-201ENSMUST00000174964 138 ntBASIC14.61□□□□□ -0.07
Cntn1P12960 Gm27397-201ENSMUST00000184997 107 ntBASIC14.61□□□□□ -0.07
Cntn1P12960 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.61□□□□□ -0.07
Cntn1P12960 Gm17968-201ENSMUST00000194902 784 ntBASIC14.61□□□□□ -0.07
Cntn1P12960 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.61□□□□□ -0.07
Cntn1P12960 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cntn1P12960 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Cntn1P12960 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.61□□□□□ -0.07
Cntn1P12960 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cntn1P12960 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cntn1P12960 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cntn1P12960 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cntn1P12960 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cntn1P12960 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cntn1P12960 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cntn1P12960 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.6□□□□□ -0.07
Cntn1P12960 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cntn1P12960 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cntn1P12960 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.6□□□□□ -0.07
Cntn1P12960 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cntn1P12960 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cntn1P12960 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Cntn1P12960 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cntn1P12960 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cntn1P12960 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.6□□□□□ -0.07
Cntn1P12960 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cntn1P12960 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.6□□□□□ -0.07
Cntn1P12960 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.6□□□□□ -0.07
Cntn1P12960 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.6□□□□□ -0.07
Cntn1P12960 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.6□□□□□ -0.07
Cntn1P12960 Gm6736-201ENSMUST00000166583 948 ntBASIC14.6□□□□□ -0.07
Cntn1P12960 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cntn1P12960 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Cntn1P12960 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cntn1P12960 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.6□□□□□ -0.07
Cntn1P12960 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.6□□□□□ -0.07
Cntn1P12960 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cntn1P12960 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cntn1P12960 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cntn1P12960 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cntn1P12960 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cntn1P12960 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Cntn1P12960 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cntn1P12960 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cntn1P12960 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cntn1P12960 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cntn1P12960 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cntn1P12960 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Cntn1P12960 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cntn1P12960 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Cntn1P12960 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cntn1P12960 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cntn1P12960 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cntn1P12960 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cntn1P12960 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cntn1P12960 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.59□□□□□ -0.07
Cntn1P12960 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms