Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl1P12850 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl1P12850 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl1P12850 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl1P12850 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl1P12850 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl1P12850 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl1P12850 Gm15794-201ENSMUST00000120182 631 ntBASIC12.64□□□□□ -0.39
Cxcl1P12850 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.64□□□□□ -0.39
Cxcl1P12850 Gm7286-201ENSMUST00000182691 1007 ntBASIC12.64□□□□□ -0.39
Cxcl1P12850 Ighv6-1-201ENSMUST00000193612 343 ntBASIC12.64□□□□□ -0.39
Cxcl1P12850 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC12.64□□□□□ -0.39
Cxcl1P12850 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cxcl1P12850 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl1P12850 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Cxcl1P12850 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cxcl1P12850 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl1P12850 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Cxcl1P12850 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.64□□□□□ -0.39
Cxcl1P12850 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cxcl1P12850 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl1P12850 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl1P12850 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl1P12850 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.64□□□□□ -0.39
Cxcl1P12850 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl1P12850 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Cxcl1P12850 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.64□□□□□ -0.39
Cxcl1P12850 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl1P12850 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Cxcl1P12850 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl1P12850 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cxcl1P12850 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Cxcl1P12850 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl1P12850 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.63□□□□□ -0.39
Cxcl1P12850 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl1P12850 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl1P12850 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl1P12850 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.63□□□□□ -0.39
Cxcl1P12850 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl1P12850 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl1P12850 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl1P12850 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC12.63□□□□□ -0.39
Cxcl1P12850 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC12.63□□□□□ -0.39
Cxcl1P12850 Rprl3-201ENSMUST00000157400 290 ntBASIC12.63□□□□□ -0.39
Cxcl1P12850 Vti1a-206ENSMUST00000225529 1244 ntBASIC12.63□□□□□ -0.39
Cxcl1P12850 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl1P12850 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl1P12850 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.63□□□□□ -0.39
Cxcl1P12850 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl1P12850 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl1P12850 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl1P12850 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl1P12850 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl1P12850 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cxcl1P12850 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cxcl1P12850 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.62□□□□□ -0.39
Cxcl1P12850 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cxcl1P12850 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cxcl1P12850 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Cxcl1P12850 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cxcl1P12850 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cxcl1P12850 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cxcl1P12850 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cxcl1P12850 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cxcl1P12850 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cxcl1P12850 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cxcl1P12850 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cxcl1P12850 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Cxcl1P12850 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Cxcl1P12850 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Cxcl1P12850 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Cxcl1P12850 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cxcl1P12850 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cxcl1P12850 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Cxcl1P12850 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Cxcl1P12850 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC12.62□□□□□ -0.39
Cxcl1P12850 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cxcl1P12850 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cxcl1P12850 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Cxcl1P12850 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cxcl1P12850 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cxcl1P12850 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cxcl1P12850 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cxcl1P12850 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cxcl1P12850 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cxcl1P12850 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cxcl1P12850 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cxcl1P12850 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cxcl1P12850 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cxcl1P12850 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Cxcl1P12850 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Cxcl1P12850 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcl1P12850 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcl1P12850 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcl1P12850 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcl1P12850 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcl1P12850 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.61□□□□□ -0.39
Cxcl1P12850 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.61□□□□□ -0.39
Cxcl1P12850 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcl1P12850 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms