Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxc6P10629 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxc6P10629 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxc6P10629 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Hoxc6P10629 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hoxc6P10629 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hoxc6P10629 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hoxc6P10629 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hoxc6P10629 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Hoxc6P10629 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Hoxc6P10629 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC16.87■□□□□ 0.29
Hoxc6P10629 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC16.87■□□□□ 0.29
Hoxc6P10629 Gm15483-201ENSMUST00000120338 456 ntBASIC16.87■□□□□ 0.29
Hoxc6P10629 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC16.87■□□□□ 0.29
Hoxc6P10629 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
Hoxc6P10629 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Hoxc6P10629 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC16.87■□□□□ 0.29
Hoxc6P10629 Gm28630-201ENSMUST00000187806 498 ntBASIC16.87■□□□□ 0.29
Hoxc6P10629 Gm18049-201ENSMUST00000208909 581 ntBASIC16.87■□□□□ 0.29
Hoxc6P10629 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hoxc6P10629 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hoxc6P10629 Gm2423-201ENSMUST00000074863 733 ntBASIC16.87■□□□□ 0.29
Hoxc6P10629 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Hoxc6P10629 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hoxc6P10629 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hoxc6P10629 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hoxc6P10629 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Hoxc6P10629 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Hoxc6P10629 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC16.87■□□□□ 0.29
Hoxc6P10629 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hoxc6P10629 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hoxc6P10629 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Hoxc6P10629 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hoxc6P10629 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hoxc6P10629 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Hoxc6P10629 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hoxc6P10629 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hoxc6P10629 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hoxc6P10629 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
Hoxc6P10629 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hoxc6P10629 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Hoxc6P10629 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC16.86■□□□□ 0.29
Hoxc6P10629 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hoxc6P10629 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Hoxc6P10629 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Hoxc6P10629 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Hoxc6P10629 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hoxc6P10629 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Hoxc6P10629 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Hoxc6P10629 AC124751.1-201ENSMUST00000222716 1408 ntBASIC16.86■□□□□ 0.29
Hoxc6P10629 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Hoxc6P10629 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC16.86■□□□□ 0.29
Hoxc6P10629 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hoxc6P10629 Gm8096-201ENSMUST00000209921 1591 ntBASIC16.85■□□□□ 0.29
Hoxc6P10629 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hoxc6P10629 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Hoxc6P10629 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Hoxc6P10629 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hoxc6P10629 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hoxc6P10629 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hoxc6P10629 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.85■□□□□ 0.29
Hoxc6P10629 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Hoxc6P10629 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC16.85■□□□□ 0.29
Hoxc6P10629 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Hoxc6P10629 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC16.85■□□□□ 0.29
Hoxc6P10629 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC16.85■□□□□ 0.29
Hoxc6P10629 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hoxc6P10629 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hoxc6P10629 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hoxc6P10629 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hoxc6P10629 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hoxc6P10629 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hoxc6P10629 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hoxc6P10629 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Hoxc6P10629 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxc6P10629 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxc6P10629 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxc6P10629 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.84■□□□□ 0.29
Hoxc6P10629 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.84■□□□□ 0.29
Hoxc6P10629 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.84■□□□□ 0.29
Hoxc6P10629 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxc6P10629 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxc6P10629 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Hoxc6P10629 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC16.84■□□□□ 0.29
Hoxc6P10629 Gm8410-201ENSMUST00000117225 605 ntBASIC16.84■□□□□ 0.29
Hoxc6P10629 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxc6P10629 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC16.84■□□□□ 0.29
Hoxc6P10629 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxc6P10629 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxc6P10629 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxc6P10629 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxc6P10629 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Hoxc6P10629 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxc6P10629 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxc6P10629 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Hoxc6P10629 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxc6P10629 Gm13233-201ENSMUST00000118760 1443 ntBASIC16.84■□□□□ 0.29
Hoxc6P10629 Gm13244-201ENSMUST00000118855 1446 ntBASIC16.84■□□□□ 0.29
Hoxc6P10629 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Hoxc6P10629 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms