Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl1P10146 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Ccl1P10146 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl1P10146 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl1P10146 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl1P10146 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC11.86□□□□□ -0.51
Ccl1P10146 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl1P10146 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Ccl1P10146 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC11.86□□□□□ -0.51
Ccl1P10146 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl1P10146 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl1P10146 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl1P10146 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl1P10146 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl1P10146 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC11.86□□□□□ -0.51
Ccl1P10146 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl1P10146 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl1P10146 Gm4217-201ENSMUST00000182243 1002 ntBASIC11.86□□□□□ -0.51
Ccl1P10146 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC11.86□□□□□ -0.51
Ccl1P10146 Gm43353-201ENSMUST00000199224 1295 ntBASIC11.86□□□□□ -0.51
Ccl1P10146 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl1P10146 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl1P10146 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl1P10146 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl1P10146 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl1P10146 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl1P10146 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl1P10146 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl1P10146 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl1P10146 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl1P10146 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl1P10146 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ccl1P10146 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl1P10146 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Ccl1P10146 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl1P10146 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl1P10146 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl1P10146 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl1P10146 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl1P10146 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Ccl1P10146 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl1P10146 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Ccl1P10146 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Ccl1P10146 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl1P10146 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl1P10146 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl1P10146 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl1P10146 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl1P10146 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl1P10146 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Ccl1P10146 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC11.85□□□□□ -0.51
Ccl1P10146 Mir1199-201ENSMUST00000117015 119 ntBASIC11.85□□□□□ -0.51
Ccl1P10146 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl1P10146 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl1P10146 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Ccl1P10146 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl1P10146 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl1P10146 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl1P10146 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl1P10146 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Ccl1P10146 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl1P10146 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl1P10146 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl1P10146 Gm7669-201ENSMUST00000210184 1603 ntBASIC11.85□□□□□ -0.51
Ccl1P10146 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl1P10146 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl1P10146 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl1P10146 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
Ccl1P10146 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl1P10146 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl1P10146 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccl1P10146 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Ccl1P10146 AC167013.2-201ENSMUST00000228520 2684 ntBASIC11.84□□□□□ -0.51
Ccl1P10146 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccl1P10146 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccl1P10146 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Ccl1P10146 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC11.84□□□□□ -0.51
Ccl1P10146 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccl1P10146 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccl1P10146 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC11.84□□□□□ -0.51
Ccl1P10146 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccl1P10146 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccl1P10146 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Ccl1P10146 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccl1P10146 Gm12441-201ENSMUST00000121806 588 ntBASIC11.84□□□□□ -0.51
Ccl1P10146 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccl1P10146 Gm6257-201ENSMUST00000163864 910 ntBASIC11.84□□□□□ -0.51
Ccl1P10146 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccl1P10146 Gm27463-201ENSMUST00000183569 57 ntBASIC11.84□□□□□ -0.51
Ccl1P10146 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccl1P10146 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccl1P10146 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccl1P10146 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccl1P10146 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccl1P10146 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccl1P10146 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccl1P10146 Gm38391-201ENSMUST00000191720 4069 ntBASIC11.84□□□□□ -0.51
Ccl1P10146 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccl1P10146 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccl1P10146 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms