Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxc9P09633 Gm5866-201ENSMUST00000177881 973 ntBASIC19.67■□□□□ 0.74
Hoxc9P09633 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC19.67■□□□□ 0.74
Hoxc9P09633 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxc9P09633 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxc9P09633 Gm42466-201ENSMUST00000202099 1301 ntBASIC19.67■□□□□ 0.74
Hoxc9P09633 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Hoxc9P09633 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxc9P09633 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxc9P09633 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC19.66■□□□□ 0.74
Hoxc9P09633 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC19.66■□□□□ 0.74
Hoxc9P09633 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Hoxc9P09633 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxc9P09633 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxc9P09633 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxc9P09633 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxc9P09633 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.66■□□□□ 0.74
Hoxc9P09633 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC19.66■□□□□ 0.74
Hoxc9P09633 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Hoxc9P09633 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC19.66■□□□□ 0.74
Hoxc9P09633 Mir7684-201ENSMUST00000183858 60 ntBASIC19.66■□□□□ 0.74
Hoxc9P09633 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxc9P09633 Gm2423-201ENSMUST00000074863 733 ntBASIC19.66■□□□□ 0.74
Hoxc9P09633 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxc9P09633 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC19.66■□□□□ 0.74
Hoxc9P09633 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Hoxc9P09633 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxc9P09633 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxc9P09633 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxc9P09633 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxc9P09633 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxc9P09633 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxc9P09633 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxc9P09633 Dancr-204ENSMUST00000132389 2347 ntBASIC19.65■□□□□ 0.74
Hoxc9P09633 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxc9P09633 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxc9P09633 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Hoxc9P09633 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC19.65■□□□□ 0.74
Hoxc9P09633 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxc9P09633 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxc9P09633 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxc9P09633 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxc9P09633 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC19.65■□□□□ 0.74
Hoxc9P09633 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Hoxc9P09633 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC19.65■□□□□ 0.74
Hoxc9P09633 Gm9063-201ENSMUST00000223299 582 ntBASIC19.65■□□□□ 0.74
Hoxc9P09633 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxc9P09633 Gm8242-201ENSMUST00000193029 1420 ntBASIC19.65■□□□□ 0.74
Hoxc9P09633 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxc9P09633 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxc9P09633 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxc9P09633 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxc9P09633 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxc9P09633 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Hoxc9P09633 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxc9P09633 Gm26917-202ENSMUST00000192833 3329 ntBASIC19.64■□□□□ 0.73
Hoxc9P09633 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Hoxc9P09633 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxc9P09633 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC19.64■□□□□ 0.73
Hoxc9P09633 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC19.64■□□□□ 0.73
Hoxc9P09633 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC19.64■□□□□ 0.73
Hoxc9P09633 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxc9P09633 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxc9P09633 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Hoxc9P09633 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxc9P09633 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxc9P09633 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxc9P09633 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxc9P09633 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxc9P09633 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxc9P09633 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxc9P09633 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxc9P09633 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxc9P09633 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxc9P09633 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Hoxc9P09633 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxc9P09633 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC19.63■□□□□ 0.73
Hoxc9P09633 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC19.63■□□□□ 0.73
Hoxc9P09633 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxc9P09633 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxc9P09633 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxc9P09633 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC19.63■□□□□ 0.73
Hoxc9P09633 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxc9P09633 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Hoxc9P09633 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
Hoxc9P09633 Gm27533-201ENSMUST00000183800 152 ntBASIC19.63■□□□□ 0.73
Hoxc9P09633 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Hoxc9P09633 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxc9P09633 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxc9P09633 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxc9P09633 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Hoxc9P09633 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Hoxc9P09633 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxc9P09633 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxc9P09633 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxc9P09633 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC19.62■□□□□ 0.73
Hoxc9P09633 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxc9P09633 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxc9P09633 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxc9P09633 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms