Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
NclP09405 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
NclP09405 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
NclP09405 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
NclP09405 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
NclP09405 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
NclP09405 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
NclP09405 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
NclP09405 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
NclP09405 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
NclP09405 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
NclP09405 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC22.56■■□□□ 1.2
NclP09405 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC22.56■■□□□ 1.2
NclP09405 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
NclP09405 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
NclP09405 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC22.56■■□□□ 1.2
NclP09405 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
NclP09405 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC22.56■■□□□ 1.2
NclP09405 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC22.56■■□□□ 1.2
NclP09405 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
NclP09405 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
NclP09405 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
NclP09405 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
NclP09405 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
NclP09405 AC133083.1-201ENSMUST00000221736 2209 ntBASIC22.55■■□□□ 1.2
NclP09405 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NclP09405 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
NclP09405 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC22.55■■□□□ 1.2
NclP09405 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NclP09405 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
NclP09405 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC22.55■■□□□ 1.2
NclP09405 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NclP09405 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC22.55■■□□□ 1.2
NclP09405 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
NclP09405 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC22.55■■□□□ 1.2
NclP09405 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
NclP09405 Gm9385-201ENSMUST00000117563 472 ntBASIC22.55■■□□□ 1.2
NclP09405 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC22.55■■□□□ 1.2
NclP09405 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC22.55■■□□□ 1.2
NclP09405 Gm20553-201ENSMUST00000204205 844 ntBASIC22.55■■□□□ 1.2
NclP09405 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC22.55■■□□□ 1.2
NclP09405 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
NclP09405 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NclP09405 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NclP09405 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
NclP09405 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NclP09405 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
NclP09405 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
NclP09405 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC22.54■■□□□ 1.2
NclP09405 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NclP09405 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NclP09405 Gm13332-201ENSMUST00000120451 1398 ntBASIC22.54■■□□□ 1.2
NclP09405 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NclP09405 Gm13365-201ENSMUST00000121188 973 ntBASIC22.54■■□□□ 1.2
NclP09405 Rpph1-201ENSMUST00000175096 319 ntBASIC22.54■■□□□ 1.2
NclP09405 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
NclP09405 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC22.54■■□□□ 1.2
NclP09405 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC22.54■■□□□ 1.2
NclP09405 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
NclP09405 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
NclP09405 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NclP09405 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
NclP09405 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
NclP09405 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
NclP09405 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NclP09405 Gm45293-201ENSMUST00000209754 1812 ntBASIC22.54■■□□□ 1.2
NclP09405 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NclP09405 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
NclP09405 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
NclP09405 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NclP09405 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
NclP09405 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
NclP09405 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NclP09405 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
NclP09405 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NclP09405 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
NclP09405 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NclP09405 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC22.53■■□□□ 1.2
NclP09405 Gpr146-202ENSMUST00000053120 1040 ntBASIC22.53■■□□□ 1.2
NclP09405 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NclP09405 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NclP09405 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
NclP09405 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
NclP09405 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NclP09405 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NclP09405 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NclP09405 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
NclP09405 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
NclP09405 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NclP09405 Gm11745-201ENSMUST00000121669 448 ntBASIC22.52■■□□□ 1.2
NclP09405 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC22.52■■□□□ 1.2
NclP09405 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC22.52■■□□□ 1.2
NclP09405 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC22.52■■□□□ 1.2
NclP09405 AC154621.1-201ENSMUST00000226155 1119 ntBASIC22.52■■□□□ 1.2
NclP09405 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
NclP09405 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
NclP09405 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC22.52■■□□□ 1.2
NclP09405 Gm10154-201ENSMUST00000084445 354 ntBASIC22.52■■□□□ 1.2
NclP09405 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NclP09405 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms