Protein–RNA interactions for Protein: P08775

Polr2a, DNA-directed RNA polymerase II subunit RPB1, mousemouse

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2aP08775 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Polr2aP08775 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Polr2aP08775 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Polr2aP08775 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Polr2aP08775 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Polr2aP08775 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Polr2aP08775 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.16■□□□□ 0.34
Polr2aP08775 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Polr2aP08775 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Polr2aP08775 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Polr2aP08775 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Polr2aP08775 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Polr2aP08775 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Polr2aP08775 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Polr2aP08775 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Polr2aP08775 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Polr2aP08775 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Polr2aP08775 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
Polr2aP08775 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Polr2aP08775 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Polr2aP08775 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Polr2aP08775 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Polr2aP08775 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Polr2aP08775 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Polr2aP08775 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Polr2aP08775 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Polr2aP08775 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Polr2aP08775 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC17.15■□□□□ 0.34
Polr2aP08775 Gm12960-201ENSMUST00000120017 1066 ntBASIC17.15■□□□□ 0.34
Polr2aP08775 Gm37748-201ENSMUST00000194379 1140 ntBASIC17.15■□□□□ 0.34
Polr2aP08775 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC17.15■□□□□ 0.34
Polr2aP08775 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Polr2aP08775 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Polr2aP08775 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Polr2aP08775 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Polr2aP08775 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Polr2aP08775 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Polr2aP08775 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Polr2aP08775 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Polr2aP08775 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Polr2aP08775 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Polr2aP08775 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Polr2aP08775 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Polr2aP08775 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Polr2aP08775 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Polr2aP08775 Gm6222-201ENSMUST00000120787 396 ntBASIC17.14■□□□□ 0.33
Polr2aP08775 Gm7820-201ENSMUST00000121012 1052 ntBASIC17.14■□□□□ 0.33
Polr2aP08775 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Polr2aP08775 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC17.14■□□□□ 0.33
Polr2aP08775 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Polr2aP08775 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Polr2aP08775 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Polr2aP08775 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Polr2aP08775 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Polr2aP08775 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Polr2aP08775 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Polr2aP08775 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Polr2aP08775 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC17.13■□□□□ 0.33
Polr2aP08775 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC17.13■□□□□ 0.33
Polr2aP08775 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Polr2aP08775 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Polr2aP08775 Tfap2a-203ENSMUST00000223869 2037 ntBASIC17.13■□□□□ 0.33
Polr2aP08775 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Polr2aP08775 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Polr2aP08775 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Polr2aP08775 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Polr2aP08775 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Polr2aP08775 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Polr2aP08775 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Polr2aP08775 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Polr2aP08775 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Polr2aP08775 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Polr2aP08775 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Polr2aP08775 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Polr2aP08775 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Polr2aP08775 Gm45098-201ENSMUST00000207179 657 ntBASIC17.13■□□□□ 0.33
Polr2aP08775 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Polr2aP08775 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Polr2aP08775 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Polr2aP08775 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Polr2aP08775 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC17.13■□□□□ 0.33
Polr2aP08775 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Polr2aP08775 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.12■□□□□ 0.33
Polr2aP08775 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Polr2aP08775 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.12■□□□□ 0.33
Polr2aP08775 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Polr2aP08775 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC17.12■□□□□ 0.33
Polr2aP08775 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Polr2aP08775 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Polr2aP08775 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Polr2aP08775 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Polr2aP08775 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC17.12■□□□□ 0.33
Polr2aP08775 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Polr2aP08775 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Polr2aP08775 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Polr2aP08775 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Polr2aP08775 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Polr2aP08775 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Polr2aP08775 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Polr2aP08775 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms