Protein–RNA interactions for Protein: P06323

T-cell receptor alpha chain V region CTL-F3, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06323 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P06323 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P06323 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.38□□□□□ -0.43
P06323 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
P06323 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
P06323 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P06323 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P06323 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
P06323 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
P06323 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P06323 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P06323 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
P06323 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.38□□□□□ -0.43
P06323 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
P06323 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
P06323 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P06323 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
P06323 Mir3081-201ENSMUST00000175305 84 ntBASIC12.38□□□□□ -0.43
P06323 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.38□□□□□ -0.43
P06323 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
P06323 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
P06323 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.38□□□□□ -0.43
P06323 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P06323 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
P06323 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.38□□□□□ -0.43
P06323 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
P06323 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
P06323 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P06323 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P06323 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P06323 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
P06323 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06323 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
P06323 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06323 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06323 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
P06323 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06323 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06323 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC12.37□□□□□ -0.43
P06323 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC12.37□□□□□ -0.43
P06323 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC12.37□□□□□ -0.43
P06323 Gm8349-201ENSMUST00000182720 1003 ntBASIC12.37□□□□□ -0.43
P06323 Gm44454-201ENSMUST00000198541 138 ntBASIC12.37□□□□□ -0.43
P06323 Gm9172-201ENSMUST00000212092 954 ntBASIC12.37□□□□□ -0.43
P06323 Gm7367-201ENSMUST00000057611 492 ntBASIC12.37□□□□□ -0.43
P06323 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
P06323 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06323 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06323 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.37□□□□□ -0.43
P06323 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.37□□□□□ -0.43
P06323 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06323 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
P06323 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
P06323 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
P06323 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06323 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.37□□□□□ -0.43
P06323 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06323 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
P06323 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
P06323 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
P06323 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
P06323 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
P06323 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
P06323 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
P06323 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
P06323 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
P06323 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
P06323 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC12.36□□□□□ -0.43
P06323 Gm27742-201ENSMUST00000184667 60 ntBASIC12.36□□□□□ -0.43
P06323 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
P06323 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC12.36□□□□□ -0.43
P06323 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
P06323 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
P06323 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
P06323 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
P06323 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
P06323 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
P06323 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
P06323 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
P06323 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
P06323 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
P06323 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
P06323 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
P06323 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
P06323 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.36□□□□□ -0.43
P06323 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC12.36□□□□□ -0.43
P06323 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
P06323 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
P06323 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
P06323 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
P06323 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P06323 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P06323 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.35□□□□□ -0.43
P06323 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
P06323 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
P06323 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
P06323 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.35□□□□□ -0.43
P06323 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
P06323 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P06323 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms