Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
P04940 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P04940 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
P04940 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
P04940 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P04940 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.35□□□□□ -0.43
P04940 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
P04940 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
P04940 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P04940 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
P04940 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
P04940 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
P04940 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
P04940 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.35□□□□□ -0.43
P04940 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.35□□□□□ -0.43
P04940 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P04940 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
P04940 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC12.35□□□□□ -0.43
P04940 Gm43767-201ENSMUST00000198933 381 ntBASIC12.35□□□□□ -0.43
P04940 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P04940 AC164629.2-201ENSMUST00000217916 270 ntBASIC12.35□□□□□ -0.43
P04940 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC12.35□□□□□ -0.43
P04940 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
P04940 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P04940 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
P04940 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
P04940 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
P04940 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P04940 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
P04940 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
P04940 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
P04940 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
P04940 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
P04940 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
P04940 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.35□□□□□ -0.43
P04940 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
P04940 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC12.35□□□□□ -0.43
P04940 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC12.35□□□□□ -0.43
P04940 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.35□□□□□ -0.43
P04940 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
P04940 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
P04940 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.35□□□□□ -0.43
P04940 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
P04940 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
P04940 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
P04940 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P04940 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P04940 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
P04940 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
P04940 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P04940 Gm37812-201ENSMUST00000195216 2475 ntBASIC12.34□□□□□ -0.43
P04940 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
P04940 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
P04940 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
P04940 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
P04940 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P04940 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P04940 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P04940 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P04940 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P04940 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
P04940 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC12.34□□□□□ -0.43
P04940 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
P04940 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC12.34□□□□□ -0.43
P04940 Gm45167-201ENSMUST00000208007 322 ntBASIC12.34□□□□□ -0.43
P04940 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P04940 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
P04940 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
P04940 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P04940 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC12.34□□□□□ -0.43
P04940 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.34□□□□□ -0.43
P04940 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P04940 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
P04940 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
P04940 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P04940 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P04940 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P04940 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
P04940 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
P04940 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
P04940 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
P04940 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
P04940 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P04940 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P04940 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
P04940 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
P04940 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
P04940 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
P04940 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04940 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04940 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04940 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
P04940 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
P04940 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04940 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04940 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04940 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04940 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
P04940 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
P04940 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms