Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H3f3cP02301 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
H3f3cP02301 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
H3f3cP02301 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
H3f3cP02301 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.1□□□□□ -0.31
H3f3cP02301 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H3f3cP02301 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H3f3cP02301 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
H3f3cP02301 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
H3f3cP02301 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
H3f3cP02301 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
H3f3cP02301 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H3f3cP02301 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.1□□□□□ -0.31
H3f3cP02301 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.1□□□□□ -0.31
H3f3cP02301 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
H3f3cP02301 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
H3f3cP02301 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
H3f3cP02301 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.1□□□□□ -0.31
H3f3cP02301 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC13.1□□□□□ -0.31
H3f3cP02301 AC159093.1-201ENSMUST00000227779 380 ntBASIC13.1□□□□□ -0.31
H3f3cP02301 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC13.1□□□□□ -0.31
H3f3cP02301 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.1□□□□□ -0.31
H3f3cP02301 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
H3f3cP02301 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.1□□□□□ -0.31
H3f3cP02301 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
H3f3cP02301 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
H3f3cP02301 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
H3f3cP02301 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.1□□□□□ -0.31
H3f3cP02301 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
H3f3cP02301 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
H3f3cP02301 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H3f3cP02301 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
H3f3cP02301 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.1□□□□□ -0.31
H3f3cP02301 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.1□□□□□ -0.31
H3f3cP02301 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H3f3cP02301 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
H3f3cP02301 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.09□□□□□ -0.31
H3f3cP02301 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
H3f3cP02301 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H3f3cP02301 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
H3f3cP02301 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
H3f3cP02301 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
H3f3cP02301 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H3f3cP02301 Gm7222-201ENSMUST00000117512 906 ntBASIC13.09□□□□□ -0.31
H3f3cP02301 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.09□□□□□ -0.31
H3f3cP02301 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
H3f3cP02301 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H3f3cP02301 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H3f3cP02301 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
H3f3cP02301 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC13.09□□□□□ -0.31
H3f3cP02301 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
H3f3cP02301 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC13.09□□□□□ -0.31
H3f3cP02301 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
H3f3cP02301 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.09□□□□□ -0.31
H3f3cP02301 Gm9449-201ENSMUST00000207265 1011 ntBASIC13.09□□□□□ -0.31
H3f3cP02301 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC13.09□□□□□ -0.31
H3f3cP02301 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
H3f3cP02301 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
H3f3cP02301 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
H3f3cP02301 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H3f3cP02301 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H3f3cP02301 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H3f3cP02301 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
H3f3cP02301 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
H3f3cP02301 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.09□□□□□ -0.31
H3f3cP02301 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H3f3cP02301 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
H3f3cP02301 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.09□□□□□ -0.31
H3f3cP02301 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
H3f3cP02301 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H3f3cP02301 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
H3f3cP02301 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
H3f3cP02301 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
H3f3cP02301 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
H3f3cP02301 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
H3f3cP02301 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
H3f3cP02301 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
H3f3cP02301 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H3f3cP02301 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
H3f3cP02301 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H3f3cP02301 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H3f3cP02301 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H3f3cP02301 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
H3f3cP02301 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H3f3cP02301 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H3f3cP02301 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
H3f3cP02301 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.08□□□□□ -0.32
H3f3cP02301 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
H3f3cP02301 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
H3f3cP02301 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H3f3cP02301 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
H3f3cP02301 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC13.08□□□□□ -0.32
H3f3cP02301 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H3f3cP02301 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H3f3cP02301 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H3f3cP02301 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H3f3cP02301 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.08□□□□□ -0.32
H3f3cP02301 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H3f3cP02301 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
H3f3cP02301 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms