Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ifna1P01572 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ifna1P01572 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ifna1P01572 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ifna1P01572 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ifna1P01572 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ifna1P01572 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC12.87□□□□□ -0.35
Ifna1P01572 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ifna1P01572 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ifna1P01572 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC12.87□□□□□ -0.35
Ifna1P01572 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Ifna1P01572 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Ifna1P01572 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Ifna1P01572 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ifna1P01572 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ifna1P01572 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Ifna1P01572 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ifna1P01572 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.87□□□□□ -0.35
Ifna1P01572 Gm8668-201ENSMUST00000120559 1447 ntBASIC12.87□□□□□ -0.35
Ifna1P01572 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ifna1P01572 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Ifna1P01572 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ifna1P01572 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ifna1P01572 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ifna1P01572 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Ifna1P01572 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ifna1P01572 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ifna1P01572 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ifna1P01572 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Ifna1P01572 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.86□□□□□ -0.35
Ifna1P01572 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ifna1P01572 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ifna1P01572 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ifna1P01572 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ifna1P01572 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ifna1P01572 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Ifna1P01572 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ifna1P01572 Gm1818-201ENSMUST00000169406 1184 ntBASIC12.86□□□□□ -0.35
Ifna1P01572 Gm6623-201ENSMUST00000173570 544 ntBASIC12.86□□□□□ -0.35
Ifna1P01572 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC12.86□□□□□ -0.35
Ifna1P01572 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ifna1P01572 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Ifna1P01572 AC130713.1-201ENSMUST00000228853 1096 ntBASIC12.86□□□□□ -0.35
Ifna1P01572 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ifna1P01572 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ifna1P01572 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ifna1P01572 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ifna1P01572 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ifna1P01572 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ifna1P01572 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ifna1P01572 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ifna1P01572 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ifna1P01572 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Ifna1P01572 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Ifna1P01572 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ifna1P01572 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ifna1P01572 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ifna1P01572 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Ifna1P01572 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ifna1P01572 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ifna1P01572 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ifna1P01572 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ifna1P01572 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.85□□□□□ -0.35
Ifna1P01572 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
Ifna1P01572 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ifna1P01572 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ifna1P01572 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ifna1P01572 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ifna1P01572 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ifna1P01572 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Ifna1P01572 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ifna1P01572 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ifna1P01572 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ifna1P01572 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ifna1P01572 Gm25406-201ENSMUST00000157599 105 ntBASIC12.85□□□□□ -0.35
Ifna1P01572 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ifna1P01572 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.85□□□□□ -0.35
Ifna1P01572 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ifna1P01572 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.85□□□□□ -0.35
Ifna1P01572 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ifna1P01572 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC12.85□□□□□ -0.35
Ifna1P01572 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Ifna1P01572 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ifna1P01572 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ifna1P01572 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ifna1P01572 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ifna1P01572 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ifna1P01572 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ifna1P01572 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ifna1P01572 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ifna1P01572 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ifna1P01572 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ifna1P01572 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Ifna1P01572 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
Ifna1P01572 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ifna1P01572 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ifna1P01572 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Ifna1P01572 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ifna1P01572 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ifna1P01572 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms