Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hdac3O88895 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hdac3O88895 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hdac3O88895 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hdac3O88895 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.68□□□□□ -0.22
Hdac3O88895 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.68□□□□□ -0.22
Hdac3O88895 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hdac3O88895 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hdac3O88895 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hdac3O88895 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hdac3O88895 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hdac3O88895 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hdac3O88895 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hdac3O88895 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hdac3O88895 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hdac3O88895 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13.67□□□□□ -0.22
Hdac3O88895 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Hdac3O88895 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC13.67□□□□□ -0.22
Hdac3O88895 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hdac3O88895 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hdac3O88895 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hdac3O88895 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hdac3O88895 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC13.67□□□□□ -0.22
Hdac3O88895 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hdac3O88895 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hdac3O88895 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hdac3O88895 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hdac3O88895 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hdac3O88895 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.67□□□□□ -0.22
Hdac3O88895 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hdac3O88895 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hdac3O88895 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hdac3O88895 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.67□□□□□ -0.22
Hdac3O88895 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hdac3O88895 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hdac3O88895 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hdac3O88895 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hdac3O88895 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.67□□□□□ -0.22
Hdac3O88895 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
Hdac3O88895 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hdac3O88895 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hdac3O88895 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC13.66□□□□□ -0.22
Hdac3O88895 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hdac3O88895 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hdac3O88895 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC13.66□□□□□ -0.22
Hdac3O88895 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hdac3O88895 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hdac3O88895 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hdac3O88895 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hdac3O88895 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.66□□□□□ -0.22
Hdac3O88895 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hdac3O88895 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hdac3O88895 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.66□□□□□ -0.22
Hdac3O88895 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC13.66□□□□□ -0.22
Hdac3O88895 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC13.66□□□□□ -0.22
Hdac3O88895 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.66□□□□□ -0.22
Hdac3O88895 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.66□□□□□ -0.22
Hdac3O88895 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hdac3O88895 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13.66□□□□□ -0.22
Hdac3O88895 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hdac3O88895 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hdac3O88895 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hdac3O88895 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Hdac3O88895 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Hdac3O88895 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hdac3O88895 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hdac3O88895 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hdac3O88895 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hdac3O88895 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hdac3O88895 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hdac3O88895 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Hdac3O88895 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hdac3O88895 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hdac3O88895 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Hdac3O88895 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hdac3O88895 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hdac3O88895 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Hdac3O88895 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hdac3O88895 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.65□□□□□ -0.22
Hdac3O88895 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Hdac3O88895 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.65□□□□□ -0.22
Hdac3O88895 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.65□□□□□ -0.22
Hdac3O88895 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.65□□□□□ -0.22
Hdac3O88895 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.65□□□□□ -0.22
Hdac3O88895 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.65□□□□□ -0.22
Hdac3O88895 Gm12497-201ENSMUST00000138778 237 ntBASIC13.65□□□□□ -0.22
Hdac3O88895 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.65□□□□□ -0.22
Hdac3O88895 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.65□□□□□ -0.22
Hdac3O88895 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.65□□□□□ -0.22
Hdac3O88895 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.65□□□□□ -0.22
Hdac3O88895 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.65□□□□□ -0.22
Hdac3O88895 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.65□□□□□ -0.22
Hdac3O88895 Gm8825-201ENSMUST00000182565 998 ntBASIC13.65□□□□□ -0.22
Hdac3O88895 Gm4518-201ENSMUST00000182638 718 ntBASIC13.65□□□□□ -0.22
Hdac3O88895 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.65□□□□□ -0.22
Hdac3O88895 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.65□□□□□ -0.22
Hdac3O88895 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.65□□□□□ -0.22
Hdac3O88895 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.65□□□□□ -0.22
Hdac3O88895 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.65□□□□□ -0.22
Hdac3O88895 Gm10293-201ENSMUST00000076317 1002 ntBASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms