Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sh2d1aO88890 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sh2d1aO88890 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sh2d1aO88890 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sh2d1aO88890 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sh2d1aO88890 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Sh2d1aO88890 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sh2d1aO88890 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sh2d1aO88890 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Sh2d1aO88890 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
Sh2d1aO88890 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC10.83□□□□□ -0.68
Sh2d1aO88890 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sh2d1aO88890 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sh2d1aO88890 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC10.82□□□□□ -0.68
Sh2d1aO88890 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sh2d1aO88890 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sh2d1aO88890 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sh2d1aO88890 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sh2d1aO88890 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sh2d1aO88890 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sh2d1aO88890 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sh2d1aO88890 Ap5m1-205ENSMUST00000227431 3757 ntBASIC10.82□□□□□ -0.68
Sh2d1aO88890 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sh2d1aO88890 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sh2d1aO88890 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sh2d1aO88890 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sh2d1aO88890 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sh2d1aO88890 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sh2d1aO88890 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Sh2d1aO88890 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sh2d1aO88890 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC10.82□□□□□ -0.68
Sh2d1aO88890 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sh2d1aO88890 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sh2d1aO88890 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Sh2d1aO88890 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC10.82□□□□□ -0.68
Sh2d1aO88890 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC10.82□□□□□ -0.68
Sh2d1aO88890 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sh2d1aO88890 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC10.82□□□□□ -0.68
Sh2d1aO88890 Vti1a-206ENSMUST00000225529 1244 ntBASIC10.82□□□□□ -0.68
Sh2d1aO88890 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sh2d1aO88890 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sh2d1aO88890 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC10.82□□□□□ -0.68
Sh2d1aO88890 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sh2d1aO88890 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sh2d1aO88890 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sh2d1aO88890 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sh2d1aO88890 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sh2d1aO88890 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sh2d1aO88890 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sh2d1aO88890 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sh2d1aO88890 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
Sh2d1aO88890 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sh2d1aO88890 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sh2d1aO88890 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sh2d1aO88890 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sh2d1aO88890 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC10.82□□□□□ -0.68
Sh2d1aO88890 Asic1-205ENSMUST00000228185 1818 ntBASIC10.81□□□□□ -0.68
Sh2d1aO88890 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
Sh2d1aO88890 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sh2d1aO88890 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sh2d1aO88890 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sh2d1aO88890 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sh2d1aO88890 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sh2d1aO88890 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sh2d1aO88890 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sh2d1aO88890 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sh2d1aO88890 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sh2d1aO88890 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sh2d1aO88890 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sh2d1aO88890 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Sh2d1aO88890 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Sh2d1aO88890 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sh2d1aO88890 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC10.81□□□□□ -0.68
Sh2d1aO88890 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sh2d1aO88890 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC10.81□□□□□ -0.68
Sh2d1aO88890 AC108846.1-201ENSMUST00000214531 513 ntBASIC10.81□□□□□ -0.68
Sh2d1aO88890 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sh2d1aO88890 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Sh2d1aO88890 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sh2d1aO88890 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sh2d1aO88890 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC10.81□□□□□ -0.68
Sh2d1aO88890 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Sh2d1aO88890 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC10.81□□□□□ -0.68
Sh2d1aO88890 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sh2d1aO88890 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sh2d1aO88890 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sh2d1aO88890 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Sh2d1aO88890 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Sh2d1aO88890 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sh2d1aO88890 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC10.81□□□□□ -0.68
Sh2d1aO88890 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Sh2d1aO88890 Gm7669-201ENSMUST00000210184 1603 ntBASIC10.8□□□□□ -0.68
Sh2d1aO88890 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Sh2d1aO88890 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Sh2d1aO88890 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sh2d1aO88890 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sh2d1aO88890 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC10.8□□□□□ -0.68
Sh2d1aO88890 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sh2d1aO88890 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Sh2d1aO88890 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms