Protein–RNA interactions for Protein: O88879

Apaf1, Apoptotic protease-activating factor 1, mousemouse

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apaf1O88879 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Apaf1O88879 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Apaf1O88879 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Apaf1O88879 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Apaf1O88879 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Apaf1O88879 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Apaf1O88879 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Apaf1O88879 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Apaf1O88879 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Apaf1O88879 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Apaf1O88879 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Apaf1O88879 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Apaf1O88879 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Apaf1O88879 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Apaf1O88879 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Apaf1O88879 Gm11839-201ENSMUST00000120647 1953 ntBASIC19.78■□□□□ 0.76
Apaf1O88879 Gm4913-201ENSMUST00000117075 1290 ntBASIC19.78■□□□□ 0.76
Apaf1O88879 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Apaf1O88879 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC19.78■□□□□ 0.76
Apaf1O88879 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Apaf1O88879 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Apaf1O88879 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Apaf1O88879 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Apaf1O88879 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC19.78■□□□□ 0.76
Apaf1O88879 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Apaf1O88879 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Apaf1O88879 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Apaf1O88879 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC19.77■□□□□ 0.76
Apaf1O88879 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Apaf1O88879 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Apaf1O88879 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Apaf1O88879 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Apaf1O88879 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Apaf1O88879 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Apaf1O88879 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC19.77■□□□□ 0.76
Apaf1O88879 Tfap2a-203ENSMUST00000223869 2037 ntBASIC19.77■□□□□ 0.76
Apaf1O88879 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Apaf1O88879 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Apaf1O88879 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
Apaf1O88879 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Apaf1O88879 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Apaf1O88879 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Apaf1O88879 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Apaf1O88879 Thap2-203ENSMUST00000218989 527 ntBASIC19.77■□□□□ 0.76
Apaf1O88879 AC164567.1-201ENSMUST00000219185 960 ntBASIC19.77■□□□□ 0.76
Apaf1O88879 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Apaf1O88879 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Apaf1O88879 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC19.77■□□□□ 0.75
Apaf1O88879 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Apaf1O88879 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Apaf1O88879 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Apaf1O88879 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Apaf1O88879 Asic1-205ENSMUST00000228185 1818 ntBASIC19.76■□□□□ 0.75
Apaf1O88879 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Apaf1O88879 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Apaf1O88879 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Apaf1O88879 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Apaf1O88879 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Apaf1O88879 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Apaf1O88879 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Apaf1O88879 Gm5049-201ENSMUST00000195878 1590 ntBASIC19.76■□□□□ 0.75
Apaf1O88879 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Apaf1O88879 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC19.76■□□□□ 0.75
Apaf1O88879 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC19.76■□□□□ 0.75
Apaf1O88879 Gm14822-201ENSMUST00000122247 291 ntBASIC19.76■□□□□ 0.75
Apaf1O88879 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC19.76■□□□□ 0.75
Apaf1O88879 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Apaf1O88879 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Apaf1O88879 Gm43073-201ENSMUST00000198200 1189 ntBASIC19.76■□□□□ 0.75
Apaf1O88879 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Apaf1O88879 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Apaf1O88879 Gm5867-201ENSMUST00000063197 592 ntBASIC19.76■□□□□ 0.75
Apaf1O88879 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Apaf1O88879 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Apaf1O88879 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Apaf1O88879 Celf4-206ENSMUST00000224553 1729 ntBASIC19.76■□□□□ 0.75
Apaf1O88879 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Apaf1O88879 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC19.76■□□□□ 0.75
Apaf1O88879 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Apaf1O88879 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Apaf1O88879 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Apaf1O88879 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Apaf1O88879 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Apaf1O88879 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Apaf1O88879 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Apaf1O88879 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Apaf1O88879 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC19.75■□□□□ 0.75
Apaf1O88879 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Apaf1O88879 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Apaf1O88879 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Apaf1O88879 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Apaf1O88879 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC19.75■□□□□ 0.75
Apaf1O88879 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Apaf1O88879 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC19.75■□□□□ 0.75
Apaf1O88879 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Apaf1O88879 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Apaf1O88879 Gm27301-201ENSMUST00000184012 127 ntBASIC19.75■□□□□ 0.75
Apaf1O88879 Gm27702-201ENSMUST00000184512 56 ntBASIC19.75■□□□□ 0.75
Apaf1O88879 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC19.75■□□□□ 0.75
Apaf1O88879 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms