Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.57□□□□□ -0.08
Vti1bO88384 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Vti1bO88384 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Vti1bO88384 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vti1bO88384 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vti1bO88384 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Vti1bO88384 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vti1bO88384 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vti1bO88384 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vti1bO88384 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Vti1bO88384 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Vti1bO88384 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vti1bO88384 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vti1bO88384 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vti1bO88384 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vti1bO88384 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.56□□□□□ -0.08
Vti1bO88384 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Vti1bO88384 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vti1bO88384 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vti1bO88384 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vti1bO88384 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vti1bO88384 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Vti1bO88384 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vti1bO88384 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vti1bO88384 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Vti1bO88384 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.56□□□□□ -0.08
Vti1bO88384 Gm28033-201ENSMUST00000184224 96 ntBASIC14.56□□□□□ -0.08
Vti1bO88384 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.56□□□□□ -0.08
Vti1bO88384 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.56□□□□□ -0.08
Vti1bO88384 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.56□□□□□ -0.08
Vti1bO88384 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.56□□□□□ -0.08
Vti1bO88384 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vti1bO88384 Gm10819-201ENSMUST00000099988 561 ntBASIC14.56□□□□□ -0.08
Vti1bO88384 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.56□□□□□ -0.08
Vti1bO88384 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Vti1bO88384 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vti1bO88384 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vti1bO88384 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vti1bO88384 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vti1bO88384 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vti1bO88384 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vti1bO88384 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.56□□□□□ -0.08
Vti1bO88384 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vti1bO88384 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vti1bO88384 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
Vti1bO88384 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.56□□□□□ -0.08
Vti1bO88384 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vti1bO88384 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vti1bO88384 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vti1bO88384 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Vti1bO88384 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vti1bO88384 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vti1bO88384 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vti1bO88384 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vti1bO88384 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Vti1bO88384 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vti1bO88384 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Vti1bO88384 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Vti1bO88384 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vti1bO88384 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vti1bO88384 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vti1bO88384 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vti1bO88384 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.55□□□□□ -0.08
Vti1bO88384 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Vti1bO88384 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.55□□□□□ -0.08
Vti1bO88384 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.55□□□□□ -0.08
Vti1bO88384 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Vti1bO88384 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Vti1bO88384 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vti1bO88384 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vti1bO88384 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Vti1bO88384 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.55□□□□□ -0.08
Vti1bO88384 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vti1bO88384 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vti1bO88384 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.55□□□□□ -0.08
Vti1bO88384 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.55□□□□□ -0.08
Vti1bO88384 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Vti1bO88384 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vti1bO88384 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vti1bO88384 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Vti1bO88384 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vti1bO88384 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vti1bO88384 Gm15165-201ENSMUST00000118140 502 ntBASIC14.54□□□□□ -0.08
Vti1bO88384 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Vti1bO88384 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.54□□□□□ -0.08
Vti1bO88384 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.54□□□□□ -0.08
Vti1bO88384 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.54□□□□□ -0.08
Vti1bO88384 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vti1bO88384 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Vti1bO88384 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vti1bO88384 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Vti1bO88384 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vti1bO88384 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vti1bO88384 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vti1bO88384 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Vti1bO88384 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
Vti1bO88384 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vti1bO88384 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vti1bO88384 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Vti1bO88384 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms