Protein–RNA interactions for Protein: O88346

Tnnt1, Troponin T, slow skeletal muscle, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnnt1O88346 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Tnnt1O88346 AC093043.3-201ENSMUST00000226531 2273 ntBASIC19.46■□□□□ 0.71
Tnnt1O88346 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Tnnt1O88346 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Tnnt1O88346 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tnnt1O88346 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tnnt1O88346 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tnnt1O88346 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tnnt1O88346 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tnnt1O88346 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tnnt1O88346 AC025913.2-201ENSMUST00000220136 1766 ntBASIC19.45■□□□□ 0.7
Tnnt1O88346 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC19.45■□□□□ 0.7
Tnnt1O88346 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tnnt1O88346 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Tnnt1O88346 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Tnnt1O88346 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
Tnnt1O88346 Gm14701-201ENSMUST00000117156 348 ntBASIC19.45■□□□□ 0.7
Tnnt1O88346 Gm12008-201ENSMUST00000117791 755 ntBASIC19.45■□□□□ 0.7
Tnnt1O88346 Gm27301-201ENSMUST00000184012 127 ntBASIC19.45■□□□□ 0.7
Tnnt1O88346 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC19.45■□□□□ 0.7
Tnnt1O88346 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Tnnt1O88346 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC19.45■□□□□ 0.7
Tnnt1O88346 AC154621.1-201ENSMUST00000226155 1119 ntBASIC19.45■□□□□ 0.7
Tnnt1O88346 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tnnt1O88346 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tnnt1O88346 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tnnt1O88346 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnnt1O88346 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnnt1O88346 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnnt1O88346 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnnt1O88346 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnnt1O88346 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnnt1O88346 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tnnt1O88346 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Tnnt1O88346 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Tnnt1O88346 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnnt1O88346 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnnt1O88346 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnnt1O88346 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tnnt1O88346 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tnnt1O88346 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC19.44■□□□□ 0.7
Tnnt1O88346 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnnt1O88346 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnnt1O88346 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnnt1O88346 Gm5421-201ENSMUST00000181698 2354 ntBASIC19.44■□□□□ 0.7
Tnnt1O88346 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Tnnt1O88346 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnnt1O88346 Gm7901-201ENSMUST00000120430 1597 ntBASIC19.44■□□□□ 0.7
Tnnt1O88346 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnnt1O88346 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tnnt1O88346 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnnt1O88346 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tnnt1O88346 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tnnt1O88346 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tnnt1O88346 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Tnnt1O88346 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tnnt1O88346 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Tnnt1O88346 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tnnt1O88346 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tnnt1O88346 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Tnnt1O88346 Gm16198-201ENSMUST00000118766 670 ntBASIC19.43■□□□□ 0.7
Tnnt1O88346 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC19.43■□□□□ 0.7
Tnnt1O88346 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Tnnt1O88346 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tnnt1O88346 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tnnt1O88346 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tnnt1O88346 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Tnnt1O88346 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tnnt1O88346 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tnnt1O88346 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Tnnt1O88346 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Tnnt1O88346 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Tnnt1O88346 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tnnt1O88346 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Tnnt1O88346 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tnnt1O88346 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tnnt1O88346 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tnnt1O88346 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tnnt1O88346 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tnnt1O88346 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tnnt1O88346 Gm11745-201ENSMUST00000121669 448 ntBASIC19.42■□□□□ 0.7
Tnnt1O88346 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC19.42■□□□□ 0.7
Tnnt1O88346 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tnnt1O88346 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC19.42■□□□□ 0.7
Tnnt1O88346 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tnnt1O88346 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC19.42■□□□□ 0.7
Tnnt1O88346 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC19.42■□□□□ 0.7
Tnnt1O88346 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tnnt1O88346 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tnnt1O88346 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tnnt1O88346 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tnnt1O88346 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tnnt1O88346 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Tnnt1O88346 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
Tnnt1O88346 Sybu-209ENSMUST00000228639 4113 ntBASIC19.41■□□□□ 0.7
Tnnt1O88346 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tnnt1O88346 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tnnt1O88346 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Tnnt1O88346 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Tnnt1O88346 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms