Protein–RNA interactions for Protein: O88343

Slc4a4, Electrogenic sodium bicarbonate cotransporter 1, mousemouse

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a4O88343 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slc4a4O88343 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
Slc4a4O88343 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slc4a4O88343 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slc4a4O88343 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slc4a4O88343 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slc4a4O88343 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slc4a4O88343 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC17.96■□□□□ 0.47
Slc4a4O88343 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slc4a4O88343 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Slc4a4O88343 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slc4a4O88343 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slc4a4O88343 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slc4a4O88343 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slc4a4O88343 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slc4a4O88343 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slc4a4O88343 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slc4a4O88343 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slc4a4O88343 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slc4a4O88343 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slc4a4O88343 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slc4a4O88343 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC17.95■□□□□ 0.46
Slc4a4O88343 Gm6736-201ENSMUST00000166583 948 ntBASIC17.95■□□□□ 0.46
Slc4a4O88343 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Slc4a4O88343 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC17.95■□□□□ 0.46
Slc4a4O88343 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.95■□□□□ 0.46
Slc4a4O88343 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slc4a4O88343 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC17.95■□□□□ 0.46
Slc4a4O88343 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slc4a4O88343 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.95■□□□□ 0.46
Slc4a4O88343 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Slc4a4O88343 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Slc4a4O88343 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Slc4a4O88343 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Slc4a4O88343 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Slc4a4O88343 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slc4a4O88343 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slc4a4O88343 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Slc4a4O88343 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slc4a4O88343 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slc4a4O88343 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Slc4a4O88343 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slc4a4O88343 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC17.94■□□□□ 0.46
Slc4a4O88343 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Slc4a4O88343 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.94■□□□□ 0.46
Slc4a4O88343 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slc4a4O88343 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.94■□□□□ 0.46
Slc4a4O88343 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Slc4a4O88343 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slc4a4O88343 Gm2756-201ENSMUST00000195851 400 ntBASIC17.94■□□□□ 0.46
Slc4a4O88343 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slc4a4O88343 Gm15500-202ENSMUST00000071641 1019 ntBASIC17.94■□□□□ 0.46
Slc4a4O88343 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Slc4a4O88343 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slc4a4O88343 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC17.94■□□□□ 0.46
Slc4a4O88343 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slc4a4O88343 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Slc4a4O88343 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Slc4a4O88343 Gm5648-201ENSMUST00000122244 1587 ntBASIC17.94■□□□□ 0.46
Slc4a4O88343 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Slc4a4O88343 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slc4a4O88343 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slc4a4O88343 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slc4a4O88343 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Slc4a4O88343 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Slc4a4O88343 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slc4a4O88343 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slc4a4O88343 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Slc4a4O88343 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Slc4a4O88343 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slc4a4O88343 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Slc4a4O88343 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Slc4a4O88343 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slc4a4O88343 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slc4a4O88343 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Slc4a4O88343 Gm27301-201ENSMUST00000184012 127 ntBASIC17.93■□□□□ 0.46
Slc4a4O88343 Gm43575-201ENSMUST00000196420 516 ntBASIC17.93■□□□□ 0.46
Slc4a4O88343 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
Slc4a4O88343 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slc4a4O88343 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slc4a4O88343 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Slc4a4O88343 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slc4a4O88343 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slc4a4O88343 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC17.93■□□□□ 0.46
Slc4a4O88343 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slc4a4O88343 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Slc4a4O88343 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Slc4a4O88343 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Slc4a4O88343 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Slc4a4O88343 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Slc4a4O88343 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Slc4a4O88343 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Slc4a4O88343 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.92■□□□□ 0.46
Slc4a4O88343 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC17.92■□□□□ 0.46
Slc4a4O88343 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Slc4a4O88343 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
Slc4a4O88343 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC17.92■□□□□ 0.46
Slc4a4O88343 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Slc4a4O88343 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Slc4a4O88343 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms