Protein–RNA interactions for Protein: O88322

Nid2, Nidogen-2, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid2O88322 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Nid2O88322 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Nid2O88322 AC153526.5-201ENSMUST00000218661 2147 ntBASIC19.64■□□□□ 0.74
Nid2O88322 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Nid2O88322 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nid2O88322 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nid2O88322 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nid2O88322 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nid2O88322 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nid2O88322 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nid2O88322 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nid2O88322 Gm42612-201ENSMUST00000197986 623 ntBASIC19.64■□□□□ 0.73
Nid2O88322 Gm43170-201ENSMUST00000199827 612 ntBASIC19.64■□□□□ 0.73
Nid2O88322 Gm45384-201ENSMUST00000210451 277 ntBASIC19.64■□□□□ 0.73
Nid2O88322 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nid2O88322 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nid2O88322 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nid2O88322 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nid2O88322 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nid2O88322 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nid2O88322 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Nid2O88322 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Nid2O88322 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nid2O88322 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nid2O88322 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nid2O88322 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nid2O88322 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
Nid2O88322 Gm6222-201ENSMUST00000120787 396 ntBASIC19.63■□□□□ 0.73
Nid2O88322 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC19.63■□□□□ 0.73
Nid2O88322 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC19.63■□□□□ 0.73
Nid2O88322 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC19.63■□□□□ 0.73
Nid2O88322 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nid2O88322 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nid2O88322 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nid2O88322 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nid2O88322 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nid2O88322 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nid2O88322 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC19.62■□□□□ 0.73
Nid2O88322 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Nid2O88322 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Nid2O88322 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nid2O88322 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nid2O88322 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nid2O88322 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nid2O88322 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nid2O88322 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC19.62■□□□□ 0.73
Nid2O88322 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nid2O88322 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Nid2O88322 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nid2O88322 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nid2O88322 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Nid2O88322 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
Nid2O88322 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nid2O88322 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nid2O88322 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Nid2O88322 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC19.61■□□□□ 0.73
Nid2O88322 Gm18018-201ENSMUST00000198273 408 ntBASIC19.61■□□□□ 0.73
Nid2O88322 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Nid2O88322 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Nid2O88322 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nid2O88322 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nid2O88322 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nid2O88322 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nid2O88322 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nid2O88322 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nid2O88322 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC19.61■□□□□ 0.73
Nid2O88322 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Nid2O88322 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
Nid2O88322 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nid2O88322 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Nid2O88322 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Nid2O88322 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Nid2O88322 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nid2O88322 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nid2O88322 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nid2O88322 Gm11478-201ENSMUST00000117851 599 ntBASIC19.6■□□□□ 0.73
Nid2O88322 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
Nid2O88322 Gm45668-201ENSMUST00000211271 493 ntBASIC19.6■□□□□ 0.73
Nid2O88322 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC19.6■□□□□ 0.73
Nid2O88322 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nid2O88322 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Nid2O88322 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nid2O88322 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nid2O88322 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nid2O88322 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC19.6■□□□□ 0.73
Nid2O88322 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nid2O88322 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Nid2O88322 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC19.6■□□□□ 0.73
Nid2O88322 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nid2O88322 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Nid2O88322 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nid2O88322 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nid2O88322 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.6■□□□□ 0.73
Nid2O88322 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
Nid2O88322 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC19.59■□□□□ 0.73
Nid2O88322 Gm12091-201ENSMUST00000146791 830 ntBASIC19.59■□□□□ 0.73
Nid2O88322 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nid2O88322 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
Nid2O88322 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nid2O88322 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms