Protein–RNA interactions for Protein: O70591

Pfdn2, Prefoldin subunit 2, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn2O70591 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pfdn2O70591 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pfdn2O70591 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pfdn2O70591 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pfdn2O70591 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Pfdn2O70591 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Pfdn2O70591 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pfdn2O70591 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pfdn2O70591 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pfdn2O70591 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC12.74□□□□□ -0.37
Pfdn2O70591 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn2O70591 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn2O70591 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Pfdn2O70591 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn2O70591 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn2O70591 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn2O70591 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn2O70591 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn2O70591 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn2O70591 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn2O70591 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn2O70591 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Pfdn2O70591 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Pfdn2O70591 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn2O70591 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC12.74□□□□□ -0.37
Pfdn2O70591 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn2O70591 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn2O70591 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn2O70591 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn2O70591 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC12.74□□□□□ -0.37
Pfdn2O70591 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn2O70591 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn2O70591 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC12.74□□□□□ -0.37
Pfdn2O70591 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn2O70591 Gm29707-201ENSMUST00000196325 491 ntBASIC12.74□□□□□ -0.37
Pfdn2O70591 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn2O70591 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn2O70591 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn2O70591 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn2O70591 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.74□□□□□ -0.37
Pfdn2O70591 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn2O70591 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn2O70591 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.74□□□□□ -0.37
Pfdn2O70591 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Pfdn2O70591 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn2O70591 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Pfdn2O70591 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Pfdn2O70591 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn2O70591 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn2O70591 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn2O70591 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn2O70591 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn2O70591 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn2O70591 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pfdn2O70591 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Pfdn2O70591 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Pfdn2O70591 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn2O70591 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn2O70591 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn2O70591 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.73□□□□□ -0.37
Pfdn2O70591 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Pfdn2O70591 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn2O70591 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn2O70591 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Pfdn2O70591 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn2O70591 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn2O70591 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn2O70591 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn2O70591 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn2O70591 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn2O70591 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC12.73□□□□□ -0.37
Pfdn2O70591 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn2O70591 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC12.73□□□□□ -0.37
Pfdn2O70591 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn2O70591 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Pfdn2O70591 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn2O70591 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn2O70591 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC12.73□□□□□ -0.37
Pfdn2O70591 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn2O70591 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn2O70591 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.73□□□□□ -0.37
Pfdn2O70591 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn2O70591 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn2O70591 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Pfdn2O70591 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn2O70591 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn2O70591 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn2O70591 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn2O70591 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Pfdn2O70591 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn2O70591 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn2O70591 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn2O70591 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn2O70591 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn2O70591 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn2O70591 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn2O70591 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn2O70591 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn2O70591 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn2O70591 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms