Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ubr1O70481 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ubr1O70481 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.54■□□□□ 0.72
Ubr1O70481 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ubr1O70481 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ubr1O70481 Gm27631-201ENSMUST00000184163 466 ntBASIC19.54■□□□□ 0.72
Ubr1O70481 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ubr1O70481 Tfap2a-203ENSMUST00000223869 2037 ntBASIC19.54■□□□□ 0.72
Ubr1O70481 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ubr1O70481 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ubr1O70481 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ubr1O70481 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ubr1O70481 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ubr1O70481 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ubr1O70481 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC19.53■□□□□ 0.72
Ubr1O70481 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ubr1O70481 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ubr1O70481 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ubr1O70481 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ubr1O70481 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ubr1O70481 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ubr1O70481 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ubr1O70481 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ubr1O70481 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ubr1O70481 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ubr1O70481 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ubr1O70481 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ubr1O70481 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ubr1O70481 Gm15653-201ENSMUST00000119247 907 ntBASIC19.52■□□□□ 0.72
Ubr1O70481 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ubr1O70481 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC19.52■□□□□ 0.72
Ubr1O70481 Gm3436-201ENSMUST00000179930 840 ntBASIC19.52■□□□□ 0.72
Ubr1O70481 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC19.52■□□□□ 0.72
Ubr1O70481 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC19.52■□□□□ 0.72
Ubr1O70481 AC156016.3-201ENSMUST00000228623 344 ntBASIC19.52■□□□□ 0.72
Ubr1O70481 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ubr1O70481 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ubr1O70481 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ubr1O70481 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ubr1O70481 Gm43195-201ENSMUST00000200614 2332 ntBASIC19.52■□□□□ 0.72
Ubr1O70481 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ubr1O70481 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ubr1O70481 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ubr1O70481 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ubr1O70481 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ubr1O70481 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Ubr1O70481 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ubr1O70481 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ubr1O70481 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
Ubr1O70481 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ubr1O70481 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ubr1O70481 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Ubr1O70481 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
Ubr1O70481 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
Ubr1O70481 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Ubr1O70481 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Ubr1O70481 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Ubr1O70481 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC19.52■□□□□ 0.71
Ubr1O70481 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ubr1O70481 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC19.51■□□□□ 0.71
Ubr1O70481 Syt7-204ENSMUST00000223586 1344 ntBASIC19.51■□□□□ 0.71
Ubr1O70481 Gm5320-201ENSMUST00000207163 1519 ntBASIC19.51■□□□□ 0.71
Ubr1O70481 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ubr1O70481 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ubr1O70481 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
Ubr1O70481 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ubr1O70481 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ubr1O70481 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ubr1O70481 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
Ubr1O70481 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ubr1O70481 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Ubr1O70481 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ubr1O70481 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ubr1O70481 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ubr1O70481 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ubr1O70481 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ubr1O70481 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ubr1O70481 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Ubr1O70481 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC19.5■□□□□ 0.71
Ubr1O70481 AC130829.1-201ENSMUST00000221548 494 ntBASIC19.5■□□□□ 0.71
Ubr1O70481 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ubr1O70481 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ubr1O70481 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Ubr1O70481 Gm11839-201ENSMUST00000120647 1953 ntBASIC19.5■□□□□ 0.71
Ubr1O70481 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC19.5■□□□□ 0.71
Ubr1O70481 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Ubr1O70481 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC19.5■□□□□ 0.71
Ubr1O70481 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC19.5■□□□□ 0.71
Ubr1O70481 Gm27528-202ENSMUST00000222916 2012 ntBASIC19.5■□□□□ 0.71
Ubr1O70481 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ubr1O70481 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ubr1O70481 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ubr1O70481 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ubr1O70481 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ubr1O70481 Gm6912-201ENSMUST00000117218 544 ntBASIC19.49■□□□□ 0.71
Ubr1O70481 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC19.49■□□□□ 0.71
Ubr1O70481 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC19.49■□□□□ 0.71
Ubr1O70481 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ubr1O70481 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ubr1O70481 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms