Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.03■□□□□ -0
Pdlim1O70400 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Pdlim1O70400 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Pdlim1O70400 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Pdlim1O70400 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pdlim1O70400 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Pdlim1O70400 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Pdlim1O70400 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
Pdlim1O70400 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.03■□□□□ -0
Pdlim1O70400 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pdlim1O70400 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pdlim1O70400 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pdlim1O70400 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pdlim1O70400 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.03■□□□□ -0
Pdlim1O70400 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pdlim1O70400 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pdlim1O70400 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.03■□□□□ -0
Pdlim1O70400 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.03■□□□□ -0
Pdlim1O70400 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pdlim1O70400 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pdlim1O70400 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pdlim1O70400 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pdlim1O70400 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Pdlim1O70400 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.03■□□□□ -0
Pdlim1O70400 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pdlim1O70400 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pdlim1O70400 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pdlim1O70400 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pdlim1O70400 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.03■□□□□ -0
Pdlim1O70400 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pdlim1O70400 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Pdlim1O70400 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pdlim1O70400 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pdlim1O70400 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Pdlim1O70400 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Pdlim1O70400 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
Pdlim1O70400 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Pdlim1O70400 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Pdlim1O70400 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Pdlim1O70400 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.02■□□□□ -0
Pdlim1O70400 Gm9727-201ENSMUST00000161387 555 ntBASIC15.02■□□□□ -0
Pdlim1O70400 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Pdlim1O70400 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Pdlim1O70400 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.02■□□□□ -0
Pdlim1O70400 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pdlim1O70400 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.02■□□□□ -0
Pdlim1O70400 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pdlim1O70400 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.02■□□□□ -0
Pdlim1O70400 Celf4-206ENSMUST00000224553 1729 ntBASIC15.02□□□□□ -0.01
Pdlim1O70400 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pdlim1O70400 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pdlim1O70400 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pdlim1O70400 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Pdlim1O70400 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pdlim1O70400 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pdlim1O70400 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Pdlim1O70400 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Pdlim1O70400 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pdlim1O70400 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pdlim1O70400 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pdlim1O70400 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Pdlim1O70400 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pdlim1O70400 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pdlim1O70400 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pdlim1O70400 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Pdlim1O70400 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pdlim1O70400 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.01□□□□□ -0.01
Pdlim1O70400 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pdlim1O70400 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pdlim1O70400 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Pdlim1O70400 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pdlim1O70400 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Pdlim1O70400 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pdlim1O70400 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.01□□□□□ -0.01
Pdlim1O70400 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pdlim1O70400 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.01□□□□□ -0.01
Pdlim1O70400 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.01□□□□□ -0.01
Pdlim1O70400 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pdlim1O70400 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.01□□□□□ -0.01
Pdlim1O70400 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.01□□□□□ -0.01
Pdlim1O70400 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.01□□□□□ -0.01
Pdlim1O70400 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Pdlim1O70400 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.01□□□□□ -0.01
Pdlim1O70400 Gm43514-201ENSMUST00000198852 424 ntBASIC15.01□□□□□ -0.01
Pdlim1O70400 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.01□□□□□ -0.01
Pdlim1O70400 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.01□□□□□ -0.01
Pdlim1O70400 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pdlim1O70400 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
Pdlim1O70400 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Pdlim1O70400 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pdlim1O70400 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.01□□□□□ -0.01
Pdlim1O70400 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pdlim1O70400 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pdlim1O70400 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pdlim1O70400 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pdlim1O70400 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pdlim1O70400 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
Pdlim1O70400 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Pdlim1O70400 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pdlim1O70400 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms