Protein–RNA interactions for Protein: O54962

Banf1, Barrier-to-autointegration factor, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Banf1O54962 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Banf1O54962 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Banf1O54962 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Banf1O54962 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Banf1O54962 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.53■□□□□ 0.08
Banf1O54962 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Banf1O54962 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.53■□□□□ 0.08
Banf1O54962 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.53■□□□□ 0.08
Banf1O54962 Gm19164-201ENSMUST00000210667 640 ntBASIC15.53■□□□□ 0.08
Banf1O54962 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Banf1O54962 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.53■□□□□ 0.08
Banf1O54962 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.53■□□□□ 0.08
Banf1O54962 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Banf1O54962 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Banf1O54962 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Banf1O54962 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Banf1O54962 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Banf1O54962 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Banf1O54962 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Banf1O54962 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.53■□□□□ 0.08
Banf1O54962 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.53■□□□□ 0.08
Banf1O54962 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Banf1O54962 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Banf1O54962 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Banf1O54962 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Banf1O54962 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Banf1O54962 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Banf1O54962 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Banf1O54962 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Banf1O54962 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Banf1O54962 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Banf1O54962 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Banf1O54962 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
Banf1O54962 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Banf1O54962 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Banf1O54962 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Banf1O54962 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.52■□□□□ 0.08
Banf1O54962 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.52■□□□□ 0.08
Banf1O54962 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC15.52■□□□□ 0.08
Banf1O54962 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.52■□□□□ 0.08
Banf1O54962 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Banf1O54962 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Banf1O54962 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.52■□□□□ 0.07
Banf1O54962 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Banf1O54962 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Banf1O54962 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Banf1O54962 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Banf1O54962 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Banf1O54962 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Banf1O54962 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Banf1O54962 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Banf1O54962 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC15.52■□□□□ 0.07
Banf1O54962 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Banf1O54962 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Banf1O54962 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.52■□□□□ 0.07
Banf1O54962 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Banf1O54962 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Banf1O54962 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Banf1O54962 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.51■□□□□ 0.07
Banf1O54962 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Banf1O54962 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Banf1O54962 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Banf1O54962 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Banf1O54962 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Banf1O54962 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Banf1O54962 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Banf1O54962 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Banf1O54962 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Banf1O54962 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Banf1O54962 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Banf1O54962 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Banf1O54962 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Banf1O54962 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Banf1O54962 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Banf1O54962 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Banf1O54962 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Banf1O54962 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
Banf1O54962 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Banf1O54962 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Banf1O54962 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.51■□□□□ 0.07
Banf1O54962 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Banf1O54962 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Banf1O54962 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.51■□□□□ 0.07
Banf1O54962 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Banf1O54962 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Banf1O54962 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Banf1O54962 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Banf1O54962 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Banf1O54962 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.51■□□□□ 0.07
Banf1O54962 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Banf1O54962 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Banf1O54962 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Banf1O54962 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Banf1O54962 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Banf1O54962 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Banf1O54962 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.5■□□□□ 0.07
Banf1O54962 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.5■□□□□ 0.07
Banf1O54962 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Banf1O54962 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Banf1O54962 Gm14722-201ENSMUST00000118943 689 ntBASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms