Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarce1O54941 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smarce1O54941 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC18.14■□□□□ 0.5
Smarce1O54941 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Smarce1O54941 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smarce1O54941 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Smarce1O54941 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smarce1O54941 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smarce1O54941 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smarce1O54941 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Smarce1O54941 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Smarce1O54941 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smarce1O54941 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smarce1O54941 Gm15372-201ENSMUST00000120729 834 ntBASIC18.14■□□□□ 0.49
Smarce1O54941 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smarce1O54941 Gm8655-201ENSMUST00000221159 852 ntBASIC18.14■□□□□ 0.49
Smarce1O54941 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC18.14■□□□□ 0.49
Smarce1O54941 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smarce1O54941 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Smarce1O54941 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Smarce1O54941 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smarce1O54941 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Smarce1O54941 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smarce1O54941 Gm37728-201ENSMUST00000195025 2292 ntBASIC18.14■□□□□ 0.49
Smarce1O54941 Gm16425-201ENSMUST00000118143 3130 ntBASIC18.14■□□□□ 0.49
Smarce1O54941 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC18.14■□□□□ 0.49
Smarce1O54941 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smarce1O54941 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smarce1O54941 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smarce1O54941 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
Smarce1O54941 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smarce1O54941 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smarce1O54941 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smarce1O54941 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smarce1O54941 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Smarce1O54941 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smarce1O54941 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smarce1O54941 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC18.13■□□□□ 0.49
Smarce1O54941 Gm27867-201ENSMUST00000184778 125 ntBASIC18.13■□□□□ 0.49
Smarce1O54941 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smarce1O54941 Otx2os1-206ENSMUST00000228153 787 ntBASIC18.13■□□□□ 0.49
Smarce1O54941 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smarce1O54941 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smarce1O54941 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC18.13■□□□□ 0.49
Smarce1O54941 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smarce1O54941 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Smarce1O54941 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
Smarce1O54941 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC18.13■□□□□ 0.49
Smarce1O54941 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smarce1O54941 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Smarce1O54941 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smarce1O54941 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Smarce1O54941 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Smarce1O54941 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smarce1O54941 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smarce1O54941 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Smarce1O54941 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.12■□□□□ 0.49
Smarce1O54941 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Smarce1O54941 Gm27704-201ENSMUST00000185094 107 ntBASIC18.12■□□□□ 0.49
Smarce1O54941 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC18.12■□□□□ 0.49
Smarce1O54941 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Smarce1O54941 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smarce1O54941 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smarce1O54941 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
Smarce1O54941 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smarce1O54941 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Smarce1O54941 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Smarce1O54941 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Smarce1O54941 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smarce1O54941 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smarce1O54941 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smarce1O54941 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smarce1O54941 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Smarce1O54941 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC18.11■□□□□ 0.49
Smarce1O54941 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smarce1O54941 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC18.11■□□□□ 0.49
Smarce1O54941 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Smarce1O54941 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Smarce1O54941 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smarce1O54941 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Smarce1O54941 AC153889.1-201ENSMUST00000219257 330 ntBASIC18.11■□□□□ 0.49
Smarce1O54941 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smarce1O54941 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Smarce1O54941 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smarce1O54941 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smarce1O54941 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smarce1O54941 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smarce1O54941 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smarce1O54941 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC18.11■□□□□ 0.49
Smarce1O54941 Gm38042-201ENSMUST00000191614 5208 ntBASIC18.11■□□□□ 0.49
Smarce1O54941 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Smarce1O54941 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Smarce1O54941 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smarce1O54941 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC18.11■□□□□ 0.49
Smarce1O54941 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC18.11■□□□□ 0.49
Smarce1O54941 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Smarce1O54941 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smarce1O54941 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Smarce1O54941 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smarce1O54941 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms