Protein–RNA interactions for Protein: O35609

Scamp3, Secretory carrier-associated membrane protein 3, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scamp3O35609 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Scamp3O35609 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Scamp3O35609 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Scamp3O35609 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scamp3O35609 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Scamp3O35609 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.2■□□□□ 0.02
Scamp3O35609 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Scamp3O35609 Gm8000-201ENSMUST00000188378 592 ntBASIC15.2■□□□□ 0.02
Scamp3O35609 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.2■□□□□ 0.02
Scamp3O35609 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.2■□□□□ 0.02
Scamp3O35609 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.2■□□□□ 0.02
Scamp3O35609 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scamp3O35609 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scamp3O35609 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scamp3O35609 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scamp3O35609 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Scamp3O35609 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scamp3O35609 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scamp3O35609 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Scamp3O35609 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scamp3O35609 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.2■□□□□ 0.02
Scamp3O35609 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.2■□□□□ 0.02
Scamp3O35609 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scamp3O35609 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
Scamp3O35609 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scamp3O35609 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.2■□□□□ 0.02
Scamp3O35609 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Scamp3O35609 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scamp3O35609 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Scamp3O35609 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Scamp3O35609 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scamp3O35609 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scamp3O35609 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.19■□□□□ 0.02
Scamp3O35609 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scamp3O35609 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scamp3O35609 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Scamp3O35609 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Scamp3O35609 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scamp3O35609 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.19■□□□□ 0.02
Scamp3O35609 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.19■□□□□ 0.02
Scamp3O35609 Gm5264-201ENSMUST00000190584 848 ntBASIC15.19■□□□□ 0.02
Scamp3O35609 Gm9682-201ENSMUST00000197505 556 ntBASIC15.19■□□□□ 0.02
Scamp3O35609 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scamp3O35609 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC15.19■□□□□ 0.02
Scamp3O35609 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC15.19■□□□□ 0.02
Scamp3O35609 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scamp3O35609 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scamp3O35609 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Scamp3O35609 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scamp3O35609 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scamp3O35609 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Scamp3O35609 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Scamp3O35609 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Scamp3O35609 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scamp3O35609 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scamp3O35609 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scamp3O35609 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scamp3O35609 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scamp3O35609 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scamp3O35609 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scamp3O35609 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scamp3O35609 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scamp3O35609 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scamp3O35609 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scamp3O35609 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scamp3O35609 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scamp3O35609 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scamp3O35609 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Scamp3O35609 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scamp3O35609 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Scamp3O35609 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Scamp3O35609 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scamp3O35609 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Scamp3O35609 Gm4995-201ENSMUST00000117247 432 ntBASIC15.18■□□□□ 0.02
Scamp3O35609 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.18■□□□□ 0.02
Scamp3O35609 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Scamp3O35609 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Scamp3O35609 Gm27300-201ENSMUST00000184085 97 ntBASIC15.18■□□□□ 0.02
Scamp3O35609 Gm27335-201ENSMUST00000184758 97 ntBASIC15.18■□□□□ 0.02
Scamp3O35609 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.18■□□□□ 0.02
Scamp3O35609 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.18■□□□□ 0.02
Scamp3O35609 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Scamp3O35609 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scamp3O35609 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Scamp3O35609 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.18■□□□□ 0.02
Scamp3O35609 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scamp3O35609 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scamp3O35609 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Scamp3O35609 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scamp3O35609 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scamp3O35609 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scamp3O35609 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scamp3O35609 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scamp3O35609 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scamp3O35609 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.18■□□□□ 0.02
Scamp3O35609 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scamp3O35609 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scamp3O35609 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scamp3O35609 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scamp3O35609 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms