Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Stx1aO35526 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Stx1aO35526 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Stx1aO35526 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Stx1aO35526 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Stx1aO35526 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Stx1aO35526 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Stx1aO35526 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Stx1aO35526 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Stx1aO35526 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Stx1aO35526 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC17.15■□□□□ 0.34
Stx1aO35526 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC17.15■□□□□ 0.34
Stx1aO35526 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.15■□□□□ 0.34
Stx1aO35526 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.15■□□□□ 0.34
Stx1aO35526 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC17.15■□□□□ 0.34
Stx1aO35526 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Stx1aO35526 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Stx1aO35526 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
Stx1aO35526 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Stx1aO35526 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Stx1aO35526 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC17.15■□□□□ 0.34
Stx1aO35526 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Stx1aO35526 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Stx1aO35526 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Stx1aO35526 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Stx1aO35526 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Stx1aO35526 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stx1aO35526 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stx1aO35526 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stx1aO35526 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stx1aO35526 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Stx1aO35526 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Stx1aO35526 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Stx1aO35526 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stx1aO35526 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Stx1aO35526 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Stx1aO35526 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stx1aO35526 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stx1aO35526 Gm17808-201ENSMUST00000200859 894 ntBASIC17.14■□□□□ 0.33
Stx1aO35526 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.14■□□□□ 0.33
Stx1aO35526 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.14■□□□□ 0.33
Stx1aO35526 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stx1aO35526 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stx1aO35526 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stx1aO35526 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stx1aO35526 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stx1aO35526 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC17.14■□□□□ 0.33
Stx1aO35526 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stx1aO35526 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stx1aO35526 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Stx1aO35526 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Stx1aO35526 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stx1aO35526 Gm8242-201ENSMUST00000193029 1420 ntBASIC17.13■□□□□ 0.33
Stx1aO35526 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stx1aO35526 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC17.13■□□□□ 0.33
Stx1aO35526 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Stx1aO35526 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stx1aO35526 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC17.13■□□□□ 0.33
Stx1aO35526 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stx1aO35526 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stx1aO35526 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC17.13■□□□□ 0.33
Stx1aO35526 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Stx1aO35526 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stx1aO35526 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC17.13■□□□□ 0.33
Stx1aO35526 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
Stx1aO35526 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Stx1aO35526 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stx1aO35526 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Stx1aO35526 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stx1aO35526 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stx1aO35526 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stx1aO35526 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stx1aO35526 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Stx1aO35526 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC17.13■□□□□ 0.33
Stx1aO35526 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Stx1aO35526 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stx1aO35526 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stx1aO35526 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stx1aO35526 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stx1aO35526 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Stx1aO35526 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stx1aO35526 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Stx1aO35526 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stx1aO35526 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Stx1aO35526 Gm37297-201ENSMUST00000192974 2384 ntBASIC17.13■□□□□ 0.33
Stx1aO35526 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.13■□□□□ 0.33
Stx1aO35526 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Stx1aO35526 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stx1aO35526 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stx1aO35526 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Stx1aO35526 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stx1aO35526 Gm43509-201ENSMUST00000196551 2594 ntBASIC17.12■□□□□ 0.33
Stx1aO35526 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stx1aO35526 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stx1aO35526 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stx1aO35526 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Stx1aO35526 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Stx1aO35526 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Stx1aO35526 Rprl3-201ENSMUST00000157400 290 ntBASIC17.12■□□□□ 0.33
Stx1aO35526 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms