Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Capn1O35350 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.14□□□□□ -0.15
Capn1O35350 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Capn1O35350 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Capn1O35350 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Capn1O35350 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Capn1O35350 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Capn1O35350 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Capn1O35350 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Capn1O35350 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Capn1O35350 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Capn1O35350 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Capn1O35350 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Capn1O35350 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.14□□□□□ -0.15
Capn1O35350 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Capn1O35350 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.14□□□□□ -0.15
Capn1O35350 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Capn1O35350 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.14□□□□□ -0.15
Capn1O35350 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.14□□□□□ -0.15
Capn1O35350 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Capn1O35350 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Capn1O35350 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Capn1O35350 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Capn1O35350 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Capn1O35350 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Capn1O35350 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Capn1O35350 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Capn1O35350 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Capn1O35350 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Capn1O35350 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Capn1O35350 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Capn1O35350 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Capn1O35350 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Capn1O35350 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Capn1O35350 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Capn1O35350 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Capn1O35350 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Capn1O35350 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Capn1O35350 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Capn1O35350 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Capn1O35350 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Capn1O35350 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Capn1O35350 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Capn1O35350 Gm6736-201ENSMUST00000166583 948 ntBASIC14.13□□□□□ -0.15
Capn1O35350 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Capn1O35350 Gm2756-201ENSMUST00000195851 400 ntBASIC14.13□□□□□ -0.15
Capn1O35350 Gm43575-201ENSMUST00000196420 516 ntBASIC14.13□□□□□ -0.15
Capn1O35350 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Capn1O35350 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.13□□□□□ -0.15
Capn1O35350 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Capn1O35350 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Capn1O35350 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Capn1O35350 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Capn1O35350 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Capn1O35350 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Capn1O35350 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Capn1O35350 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Capn1O35350 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Capn1O35350 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Capn1O35350 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Capn1O35350 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.12□□□□□ -0.15
Capn1O35350 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Capn1O35350 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Capn1O35350 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Capn1O35350 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Capn1O35350 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.12□□□□□ -0.15
Capn1O35350 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Capn1O35350 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Capn1O35350 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Capn1O35350 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Capn1O35350 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Capn1O35350 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Capn1O35350 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Capn1O35350 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.12□□□□□ -0.15
Capn1O35350 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Capn1O35350 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.12□□□□□ -0.15
Capn1O35350 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Capn1O35350 Gm10175-201ENSMUST00000086013 645 ntBASIC14.12□□□□□ -0.15
Capn1O35350 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Capn1O35350 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.12□□□□□ -0.15
Capn1O35350 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Capn1O35350 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Capn1O35350 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Capn1O35350 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.12□□□□□ -0.15
Capn1O35350 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.12□□□□□ -0.15
Capn1O35350 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Capn1O35350 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.12□□□□□ -0.15
Capn1O35350 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Capn1O35350 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Capn1O35350 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Capn1O35350 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Capn1O35350 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Capn1O35350 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Capn1O35350 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Capn1O35350 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Capn1O35350 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.11□□□□□ -0.15
Capn1O35350 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Capn1O35350 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Capn1O35350 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Capn1O35350 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms