Protein–RNA interactions for Protein: O35305

Tnfrsf11a, Tumor necrosis factor receptor superfamily member 11A, mousemouse

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11aO35305 Gm18246-201ENSMUST00000221023 728 ntBASIC16.4■□□□□ 0.22
Tnfrsf11aO35305 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.4■□□□□ 0.22
Tnfrsf11aO35305 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf11aO35305 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf11aO35305 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf11aO35305 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf11aO35305 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf11aO35305 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.4■□□□□ 0.22
Tnfrsf11aO35305 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf11aO35305 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tnfrsf11aO35305 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnfrsf11aO35305 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
Tnfrsf11aO35305 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnfrsf11aO35305 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.39■□□□□ 0.21
Tnfrsf11aO35305 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Tnfrsf11aO35305 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.39■□□□□ 0.21
Tnfrsf11aO35305 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.39■□□□□ 0.21
Tnfrsf11aO35305 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC16.39■□□□□ 0.21
Tnfrsf11aO35305 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnfrsf11aO35305 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnfrsf11aO35305 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnfrsf11aO35305 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnfrsf11aO35305 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Tnfrsf11aO35305 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tnfrsf11aO35305 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC16.39■□□□□ 0.21
Tnfrsf11aO35305 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Tnfrsf11aO35305 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfrsf11aO35305 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfrsf11aO35305 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.38■□□□□ 0.21
Tnfrsf11aO35305 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfrsf11aO35305 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfrsf11aO35305 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfrsf11aO35305 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfrsf11aO35305 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfrsf11aO35305 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfrsf11aO35305 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfrsf11aO35305 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.38■□□□□ 0.21
Tnfrsf11aO35305 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.38■□□□□ 0.21
Tnfrsf11aO35305 Psmb5-202ENSMUST00000227257 622 ntBASIC16.38■□□□□ 0.21
Tnfrsf11aO35305 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfrsf11aO35305 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfrsf11aO35305 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfrsf11aO35305 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Tnfrsf11aO35305 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfrsf11aO35305 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfrsf11aO35305 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfrsf11aO35305 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfrsf11aO35305 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfrsf11aO35305 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Tnfrsf11aO35305 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Tnfrsf11aO35305 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tnfrsf11aO35305 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tnfrsf11aO35305 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tnfrsf11aO35305 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Tnfrsf11aO35305 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tnfrsf11aO35305 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tnfrsf11aO35305 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Tnfrsf11aO35305 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tnfrsf11aO35305 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.37■□□□□ 0.21
Tnfrsf11aO35305 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tnfrsf11aO35305 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tnfrsf11aO35305 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Tnfrsf11aO35305 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.37■□□□□ 0.21
Tnfrsf11aO35305 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
Tnfrsf11aO35305 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Tnfrsf11aO35305 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.37■□□□□ 0.21
Tnfrsf11aO35305 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.37■□□□□ 0.21
Tnfrsf11aO35305 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.37■□□□□ 0.21
Tnfrsf11aO35305 Gm5364-201ENSMUST00000216789 889 ntBASIC16.37■□□□□ 0.21
Tnfrsf11aO35305 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.37■□□□□ 0.21
Tnfrsf11aO35305 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tnfrsf11aO35305 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tnfrsf11aO35305 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tnfrsf11aO35305 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Tnfrsf11aO35305 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC16.37■□□□□ 0.21
Tnfrsf11aO35305 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.37■□□□□ 0.21
Tnfrsf11aO35305 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tnfrsf11aO35305 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.37■□□□□ 0.21
Tnfrsf11aO35305 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tnfrsf11aO35305 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tnfrsf11aO35305 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tnfrsf11aO35305 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
Tnfrsf11aO35305 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tnfrsf11aO35305 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tnfrsf11aO35305 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tnfrsf11aO35305 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tnfrsf11aO35305 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Tnfrsf11aO35305 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Tnfrsf11aO35305 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.36■□□□□ 0.21
Tnfrsf11aO35305 Gm27525-201ENSMUST00000184465 107 ntBASIC16.36■□□□□ 0.21
Tnfrsf11aO35305 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC16.36■□□□□ 0.21
Tnfrsf11aO35305 AC164567.1-201ENSMUST00000219185 960 ntBASIC16.36■□□□□ 0.21
Tnfrsf11aO35305 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tnfrsf11aO35305 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tnfrsf11aO35305 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Tnfrsf11aO35305 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Tnfrsf11aO35305 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tnfrsf11aO35305 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tnfrsf11aO35305 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tnfrsf11aO35305 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms