Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.34□□□□□ -0.11
Cx3cl1O35188 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cx3cl1O35188 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.34□□□□□ -0.11
Cx3cl1O35188 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cx3cl1O35188 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cx3cl1O35188 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cx3cl1O35188 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cx3cl1O35188 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Cx3cl1O35188 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cx3cl1O35188 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Cx3cl1O35188 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cx3cl1O35188 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cx3cl1O35188 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.34□□□□□ -0.11
Cx3cl1O35188 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cx3cl1O35188 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Cx3cl1O35188 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.34□□□□□ -0.11
Cx3cl1O35188 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cx3cl1O35188 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.34□□□□□ -0.11
Cx3cl1O35188 Gm18489-201ENSMUST00000172565 551 ntBASIC14.34□□□□□ -0.11
Cx3cl1O35188 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cx3cl1O35188 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cx3cl1O35188 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cx3cl1O35188 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cx3cl1O35188 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cx3cl1O35188 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cx3cl1O35188 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cx3cl1O35188 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Cx3cl1O35188 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cx3cl1O35188 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cx3cl1O35188 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Cx3cl1O35188 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cx3cl1O35188 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cx3cl1O35188 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cx3cl1O35188 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cx3cl1O35188 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cx3cl1O35188 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cx3cl1O35188 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cx3cl1O35188 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cx3cl1O35188 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.11
Cx3cl1O35188 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cx3cl1O35188 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cx3cl1O35188 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cx3cl1O35188 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cx3cl1O35188 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cx3cl1O35188 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cx3cl1O35188 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Cx3cl1O35188 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cx3cl1O35188 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cx3cl1O35188 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Cx3cl1O35188 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cx3cl1O35188 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cx3cl1O35188 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cx3cl1O35188 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cx3cl1O35188 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.33□□□□□ -0.12
Cx3cl1O35188 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cx3cl1O35188 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.33□□□□□ -0.12
Cx3cl1O35188 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.33□□□□□ -0.12
Cx3cl1O35188 Gm27628-201ENSMUST00000184911 107 ntBASIC14.33□□□□□ -0.12
Cx3cl1O35188 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.33□□□□□ -0.12
Cx3cl1O35188 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.33□□□□□ -0.12
Cx3cl1O35188 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Cx3cl1O35188 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cx3cl1O35188 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cx3cl1O35188 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cx3cl1O35188 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cx3cl1O35188 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cx3cl1O35188 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cx3cl1O35188 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cx3cl1O35188 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Cx3cl1O35188 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cx3cl1O35188 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cx3cl1O35188 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cx3cl1O35188 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Cx3cl1O35188 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Cx3cl1O35188 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cx3cl1O35188 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cx3cl1O35188 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cx3cl1O35188 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cx3cl1O35188 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.32□□□□□ -0.12
Cx3cl1O35188 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cx3cl1O35188 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cx3cl1O35188 Gm1401-201ENSMUST00000122048 772 ntBASIC14.32□□□□□ -0.12
Cx3cl1O35188 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.32□□□□□ -0.12
Cx3cl1O35188 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cx3cl1O35188 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cx3cl1O35188 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cx3cl1O35188 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Cx3cl1O35188 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cx3cl1O35188 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cx3cl1O35188 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cx3cl1O35188 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cx3cl1O35188 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.32□□□□□ -0.12
Cx3cl1O35188 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cx3cl1O35188 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cx3cl1O35188 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cx3cl1O35188 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Cx3cl1O35188 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cx3cl1O35188 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cx3cl1O35188 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cx3cl1O35188 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms