Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hps1O08983 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Hps1O08983 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hps1O08983 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Hps1O08983 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Hps1O08983 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hps1O08983 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hps1O08983 App-207ENSMUST00000227737 2827 ntBASIC14.18□□□□□ -0.14
Hps1O08983 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Hps1O08983 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Hps1O08983 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.17□□□□□ -0.14
Hps1O08983 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Hps1O08983 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hps1O08983 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hps1O08983 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Hps1O08983 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Hps1O08983 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hps1O08983 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hps1O08983 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hps1O08983 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Hps1O08983 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Hps1O08983 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hps1O08983 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hps1O08983 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hps1O08983 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hps1O08983 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hps1O08983 Gm12895-201ENSMUST00000122214 226 ntBASIC14.17□□□□□ -0.14
Hps1O08983 Gm11452-201ENSMUST00000122376 690 ntBASIC14.17□□□□□ -0.14
Hps1O08983 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hps1O08983 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hps1O08983 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hps1O08983 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hps1O08983 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.17□□□□□ -0.14
Hps1O08983 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.17□□□□□ -0.14
Hps1O08983 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.17□□□□□ -0.14
Hps1O08983 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hps1O08983 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Hps1O08983 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hps1O08983 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hps1O08983 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hps1O08983 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.17□□□□□ -0.14
Hps1O08983 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hps1O08983 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hps1O08983 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hps1O08983 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hps1O08983 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hps1O08983 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hps1O08983 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hps1O08983 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hps1O08983 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hps1O08983 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hps1O08983 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hps1O08983 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hps1O08983 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hps1O08983 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.16□□□□□ -0.14
Hps1O08983 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hps1O08983 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hps1O08983 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hps1O08983 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Hps1O08983 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hps1O08983 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hps1O08983 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hps1O08983 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hps1O08983 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
Hps1O08983 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hps1O08983 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hps1O08983 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hps1O08983 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Hps1O08983 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hps1O08983 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hps1O08983 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hps1O08983 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hps1O08983 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.16□□□□□ -0.14
Hps1O08983 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Hps1O08983 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.16□□□□□ -0.14
Hps1O08983 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hps1O08983 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.16□□□□□ -0.14
Hps1O08983 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.16□□□□□ -0.14
Hps1O08983 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.16□□□□□ -0.14
Hps1O08983 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hps1O08983 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.16□□□□□ -0.14
Hps1O08983 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Hps1O08983 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hps1O08983 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hps1O08983 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hps1O08983 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Hps1O08983 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hps1O08983 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Hps1O08983 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hps1O08983 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hps1O08983 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hps1O08983 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hps1O08983 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Hps1O08983 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Hps1O08983 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hps1O08983 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hps1O08983 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hps1O08983 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.15□□□□□ -0.14
Hps1O08983 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hps1O08983 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms