Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Tnfrsf11bO08712 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.5■□□□□ 0.07
Tnfrsf11bO08712 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tnfrsf11bO08712 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Tnfrsf11bO08712 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tnfrsf11bO08712 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tnfrsf11bO08712 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Tnfrsf11bO08712 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.5■□□□□ 0.07
Tnfrsf11bO08712 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
Tnfrsf11bO08712 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tnfrsf11bO08712 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tnfrsf11bO08712 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tnfrsf11bO08712 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.49■□□□□ 0.07
Tnfrsf11bO08712 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.49■□□□□ 0.07
Tnfrsf11bO08712 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Tnfrsf11bO08712 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.49■□□□□ 0.07
Tnfrsf11bO08712 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.49■□□□□ 0.07
Tnfrsf11bO08712 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tnfrsf11bO08712 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tnfrsf11bO08712 Efs-202ENSMUST00000227037 2540 ntBASIC15.49■□□□□ 0.07
Tnfrsf11bO08712 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Tnfrsf11bO08712 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Tnfrsf11bO08712 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tnfrsf11bO08712 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tnfrsf11bO08712 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.49■□□□□ 0.07
Tnfrsf11bO08712 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Tnfrsf11bO08712 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.49■□□□□ 0.07
Tnfrsf11bO08712 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.49■□□□□ 0.07
Tnfrsf11bO08712 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.49■□□□□ 0.07
Tnfrsf11bO08712 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tnfrsf11bO08712 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Tnfrsf11bO08712 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tnfrsf11bO08712 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Tnfrsf11bO08712 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tnfrsf11bO08712 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Tnfrsf11bO08712 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tnfrsf11bO08712 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tnfrsf11bO08712 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Tnfrsf11bO08712 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tnfrsf11bO08712 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tnfrsf11bO08712 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Tnfrsf11bO08712 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tnfrsf11bO08712 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.48■□□□□ 0.07
Tnfrsf11bO08712 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.48■□□□□ 0.07
Tnfrsf11bO08712 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
Tnfrsf11bO08712 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Tnfrsf11bO08712 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tnfrsf11bO08712 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tnfrsf11bO08712 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.48■□□□□ 0.07
Tnfrsf11bO08712 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tnfrsf11bO08712 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tnfrsf11bO08712 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.48■□□□□ 0.07
Tnfrsf11bO08712 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Tnfrsf11bO08712 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.48■□□□□ 0.07
Tnfrsf11bO08712 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.48■□□□□ 0.07
Tnfrsf11bO08712 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Tnfrsf11bO08712 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Tnfrsf11bO08712 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.48■□□□□ 0.07
Tnfrsf11bO08712 Gm18669-201ENSMUST00000216049 778 ntBASIC15.48■□□□□ 0.07
Tnfrsf11bO08712 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.48■□□□□ 0.07
Tnfrsf11bO08712 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tnfrsf11bO08712 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Tnfrsf11bO08712 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tnfrsf11bO08712 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.48■□□□□ 0.07
Tnfrsf11bO08712 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tnfrsf11bO08712 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tnfrsf11bO08712 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Tnfrsf11bO08712 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tnfrsf11bO08712 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
Tnfrsf11bO08712 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tnfrsf11bO08712 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
Tnfrsf11bO08712 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tnfrsf11bO08712 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tnfrsf11bO08712 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tnfrsf11bO08712 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tnfrsf11bO08712 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Tnfrsf11bO08712 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tnfrsf11bO08712 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tnfrsf11bO08712 Gm27646-201ENSMUST00000183989 110 ntBASIC15.47■□□□□ 0.07
Tnfrsf11bO08712 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.47■□□□□ 0.07
Tnfrsf11bO08712 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tnfrsf11bO08712 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.47■□□□□ 0.07
Tnfrsf11bO08712 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Tnfrsf11bO08712 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tnfrsf11bO08712 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tnfrsf11bO08712 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Tnfrsf11bO08712 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tnfrsf11bO08712 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Tnfrsf11bO08712 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tnfrsf11bO08712 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tnfrsf11bO08712 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tnfrsf11bO08712 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tnfrsf11bO08712 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Tnfrsf11bO08712 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tnfrsf11bO08712 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tnfrsf11bO08712 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tnfrsf11bO08712 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Tnfrsf11bO08712 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tnfrsf11bO08712 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tnfrsf11bO08712 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms