Protein–RNA interactions for Protein: O08602

Raet1a, Retinoic acid early-inducible protein 1-alpha, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1aO08602 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Raet1aO08602 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.54□□□□□ -0.24
Raet1aO08602 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Raet1aO08602 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Raet1aO08602 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Raet1aO08602 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.53□□□□□ -0.24
Raet1aO08602 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.53□□□□□ -0.24
Raet1aO08602 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Raet1aO08602 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Raet1aO08602 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Raet1aO08602 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Raet1aO08602 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Raet1aO08602 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Raet1aO08602 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Raet1aO08602 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Raet1aO08602 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.53□□□□□ -0.24
Raet1aO08602 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Raet1aO08602 Gm2308-201ENSMUST00000166539 1004 ntBASIC13.53□□□□□ -0.24
Raet1aO08602 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Raet1aO08602 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC13.53□□□□□ -0.24
Raet1aO08602 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.53□□□□□ -0.24
Raet1aO08602 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Raet1aO08602 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Raet1aO08602 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Raet1aO08602 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Raet1aO08602 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Raet1aO08602 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Raet1aO08602 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Raet1aO08602 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13.53□□□□□ -0.24
Raet1aO08602 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Raet1aO08602 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Raet1aO08602 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Raet1aO08602 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Raet1aO08602 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Raet1aO08602 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Raet1aO08602 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Raet1aO08602 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.52□□□□□ -0.24
Raet1aO08602 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Raet1aO08602 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Raet1aO08602 Gm11185-201ENSMUST00000117732 1007 ntBASIC13.52□□□□□ -0.25
Raet1aO08602 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.52□□□□□ -0.25
Raet1aO08602 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Raet1aO08602 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Raet1aO08602 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Raet1aO08602 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Raet1aO08602 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Raet1aO08602 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.52□□□□□ -0.25
Raet1aO08602 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Raet1aO08602 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Raet1aO08602 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Raet1aO08602 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Raet1aO08602 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Raet1aO08602 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Raet1aO08602 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Raet1aO08602 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Raet1aO08602 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Raet1aO08602 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
Raet1aO08602 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.52□□□□□ -0.25
Raet1aO08602 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Raet1aO08602 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Raet1aO08602 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Raet1aO08602 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Raet1aO08602 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.25
Raet1aO08602 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Raet1aO08602 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Raet1aO08602 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Raet1aO08602 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Raet1aO08602 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Raet1aO08602 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Raet1aO08602 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Raet1aO08602 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Raet1aO08602 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.51□□□□□ -0.25
Raet1aO08602 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Raet1aO08602 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Raet1aO08602 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Raet1aO08602 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Raet1aO08602 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.51□□□□□ -0.25
Raet1aO08602 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Raet1aO08602 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Raet1aO08602 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC13.51□□□□□ -0.25
Raet1aO08602 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Raet1aO08602 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC13.51□□□□□ -0.25
Raet1aO08602 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC13.51□□□□□ -0.25
Raet1aO08602 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Raet1aO08602 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Raet1aO08602 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Raet1aO08602 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Raet1aO08602 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Raet1aO08602 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.51□□□□□ -0.25
Raet1aO08602 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Raet1aO08602 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Raet1aO08602 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Raet1aO08602 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Raet1aO08602 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Raet1aO08602 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Raet1aO08602 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Raet1aO08602 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Raet1aO08602 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Raet1aO08602 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Raet1aO08602 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms