Protein–RNA interactions for Protein: G5E861

Sclt1, Sodium channel and clathrin linker 1, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sclt1G5E861 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sclt1G5E861 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sclt1G5E861 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sclt1G5E861 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.42■□□□□ 0.22
Sclt1G5E861 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Sclt1G5E861 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sclt1G5E861 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sclt1G5E861 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Sclt1G5E861 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sclt1G5E861 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sclt1G5E861 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.41■□□□□ 0.22
Sclt1G5E861 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sclt1G5E861 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sclt1G5E861 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sclt1G5E861 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sclt1G5E861 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Sclt1G5E861 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sclt1G5E861 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sclt1G5E861 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sclt1G5E861 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
Sclt1G5E861 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Sclt1G5E861 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Sclt1G5E861 Gm28033-201ENSMUST00000184224 96 ntBASIC16.41■□□□□ 0.22
Sclt1G5E861 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.41■□□□□ 0.22
Sclt1G5E861 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.41■□□□□ 0.22
Sclt1G5E861 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sclt1G5E861 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.41■□□□□ 0.22
Sclt1G5E861 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
Sclt1G5E861 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sclt1G5E861 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sclt1G5E861 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sclt1G5E861 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sclt1G5E861 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sclt1G5E861 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sclt1G5E861 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.41■□□□□ 0.22
Sclt1G5E861 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sclt1G5E861 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sclt1G5E861 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Sclt1G5E861 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sclt1G5E861 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Sclt1G5E861 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Sclt1G5E861 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sclt1G5E861 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.4■□□□□ 0.22
Sclt1G5E861 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sclt1G5E861 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC16.4■□□□□ 0.22
Sclt1G5E861 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sclt1G5E861 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sclt1G5E861 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sclt1G5E861 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sclt1G5E861 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Sclt1G5E861 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sclt1G5E861 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sclt1G5E861 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sclt1G5E861 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sclt1G5E861 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sclt1G5E861 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sclt1G5E861 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sclt1G5E861 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.4■□□□□ 0.22
Sclt1G5E861 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Sclt1G5E861 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Sclt1G5E861 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.4■□□□□ 0.22
Sclt1G5E861 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sclt1G5E861 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.4■□□□□ 0.22
Sclt1G5E861 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.4■□□□□ 0.22
Sclt1G5E861 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sclt1G5E861 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sclt1G5E861 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sclt1G5E861 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sclt1G5E861 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sclt1G5E861 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sclt1G5E861 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sclt1G5E861 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.4■□□□□ 0.22
Sclt1G5E861 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.4■□□□□ 0.22
Sclt1G5E861 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sclt1G5E861 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
Sclt1G5E861 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.39■□□□□ 0.21
Sclt1G5E861 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sclt1G5E861 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.39■□□□□ 0.21
Sclt1G5E861 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sclt1G5E861 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sclt1G5E861 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sclt1G5E861 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Sclt1G5E861 Gm9103-201ENSMUST00000119371 405 ntBASIC16.39■□□□□ 0.21
Sclt1G5E861 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sclt1G5E861 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Sclt1G5E861 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.39■□□□□ 0.21
Sclt1G5E861 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.39■□□□□ 0.21
Sclt1G5E861 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sclt1G5E861 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.39■□□□□ 0.21
Sclt1G5E861 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sclt1G5E861 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sclt1G5E861 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sclt1G5E861 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sclt1G5E861 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sclt1G5E861 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sclt1G5E861 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sclt1G5E861 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sclt1G5E861 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sclt1G5E861 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC16.38■□□□□ 0.21
Sclt1G5E861 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms