Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim55G3X8Y1 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim55G3X8Y1 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Trim55G3X8Y1 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trim55G3X8Y1 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim55G3X8Y1 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trim55G3X8Y1 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim55G3X8Y1 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim55G3X8Y1 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim55G3X8Y1 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim55G3X8Y1 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim55G3X8Y1 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim55G3X8Y1 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim55G3X8Y1 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim55G3X8Y1 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trim55G3X8Y1 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim55G3X8Y1 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC15.71■□□□□ 0.11
Trim55G3X8Y1 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Trim55G3X8Y1 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim55G3X8Y1 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC15.71■□□□□ 0.11
Trim55G3X8Y1 Gm37025-201ENSMUST00000195159 829 ntBASIC15.71■□□□□ 0.11
Trim55G3X8Y1 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim55G3X8Y1 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim55G3X8Y1 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC15.71■□□□□ 0.11
Trim55G3X8Y1 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trim55G3X8Y1 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim55G3X8Y1 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim55G3X8Y1 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim55G3X8Y1 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trim55G3X8Y1 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trim55G3X8Y1 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trim55G3X8Y1 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trim55G3X8Y1 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Trim55G3X8Y1 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim55G3X8Y1 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim55G3X8Y1 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trim55G3X8Y1 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim55G3X8Y1 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim55G3X8Y1 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim55G3X8Y1 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim55G3X8Y1 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC15.7■□□□□ 0.1
Trim55G3X8Y1 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim55G3X8Y1 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim55G3X8Y1 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim55G3X8Y1 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim55G3X8Y1 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim55G3X8Y1 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim55G3X8Y1 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim55G3X8Y1 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15.7■□□□□ 0.1
Trim55G3X8Y1 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim55G3X8Y1 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Trim55G3X8Y1 Rubie-203ENSMUST00000227803 2430 ntBASIC15.7■□□□□ 0.1
Trim55G3X8Y1 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim55G3X8Y1 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trim55G3X8Y1 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.7■□□□□ 0.1
Trim55G3X8Y1 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC15.7■□□□□ 0.1
Trim55G3X8Y1 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim55G3X8Y1 Gm43364-201ENSMUST00000196046 3274 ntBASIC15.7■□□□□ 0.1
Trim55G3X8Y1 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Trim55G3X8Y1 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trim55G3X8Y1 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim55G3X8Y1 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trim55G3X8Y1 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trim55G3X8Y1 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim55G3X8Y1 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim55G3X8Y1 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim55G3X8Y1 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim55G3X8Y1 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Trim55G3X8Y1 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim55G3X8Y1 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC15.69■□□□□ 0.1
Trim55G3X8Y1 Gm12896-201ENSMUST00000118430 226 ntBASIC15.69■□□□□ 0.1
Trim55G3X8Y1 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC15.69■□□□□ 0.1
Trim55G3X8Y1 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim55G3X8Y1 Gm27275-201ENSMUST00000184318 272 ntBASIC15.69■□□□□ 0.1
Trim55G3X8Y1 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim55G3X8Y1 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim55G3X8Y1 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim55G3X8Y1 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim55G3X8Y1 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim55G3X8Y1 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim55G3X8Y1 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim55G3X8Y1 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim55G3X8Y1 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim55G3X8Y1 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim55G3X8Y1 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim55G3X8Y1 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim55G3X8Y1 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim55G3X8Y1 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim55G3X8Y1 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trim55G3X8Y1 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim55G3X8Y1 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim55G3X8Y1 Kcnk16-202ENSMUST00000225596 2127 ntBASIC15.68■□□□□ 0.1
Trim55G3X8Y1 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim55G3X8Y1 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim55G3X8Y1 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim55G3X8Y1 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim55G3X8Y1 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim55G3X8Y1 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trim55G3X8Y1 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim55G3X8Y1 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms