Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
Atf6F6VAN0 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atf6F6VAN0 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Atf6F6VAN0 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Atf6F6VAN0 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atf6F6VAN0 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atf6F6VAN0 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atf6F6VAN0 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atf6F6VAN0 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.68■□□□□ 0.1
Atf6F6VAN0 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Atf6F6VAN0 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Atf6F6VAN0 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Atf6F6VAN0 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atf6F6VAN0 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atf6F6VAN0 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atf6F6VAN0 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.68■□□□□ 0.1
Atf6F6VAN0 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Atf6F6VAN0 Gm25990-201ENSMUST00000102440 86 ntBASIC15.68■□□□□ 0.1
Atf6F6VAN0 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Atf6F6VAN0 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atf6F6VAN0 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atf6F6VAN0 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.68■□□□□ 0.1
Atf6F6VAN0 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.68■□□□□ 0.1
Atf6F6VAN0 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Atf6F6VAN0 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.68■□□□□ 0.1
Atf6F6VAN0 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atf6F6VAN0 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
Atf6F6VAN0 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Atf6F6VAN0 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Atf6F6VAN0 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Atf6F6VAN0 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.68■□□□□ 0.1
Atf6F6VAN0 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.68■□□□□ 0.1
Atf6F6VAN0 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Atf6F6VAN0 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Atf6F6VAN0 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.67■□□□□ 0.1
Atf6F6VAN0 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.67■□□□□ 0.1
Atf6F6VAN0 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.67■□□□□ 0.1
Atf6F6VAN0 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Atf6F6VAN0 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Atf6F6VAN0 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Atf6F6VAN0 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.67■□□□□ 0.1
Atf6F6VAN0 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.67■□□□□ 0.1
Atf6F6VAN0 Gm8318-201ENSMUST00000182954 872 ntBASIC15.67■□□□□ 0.1
Atf6F6VAN0 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Atf6F6VAN0 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Atf6F6VAN0 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Atf6F6VAN0 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Atf6F6VAN0 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Atf6F6VAN0 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Atf6F6VAN0 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Atf6F6VAN0 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Atf6F6VAN0 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Atf6F6VAN0 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Atf6F6VAN0 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15.66■□□□□ 0.1
Atf6F6VAN0 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Atf6F6VAN0 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Atf6F6VAN0 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Atf6F6VAN0 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Atf6F6VAN0 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.66■□□□□ 0.1
Atf6F6VAN0 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Atf6F6VAN0 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Atf6F6VAN0 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Atf6F6VAN0 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.66■□□□□ 0.1
Atf6F6VAN0 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.66■□□□□ 0.1
Atf6F6VAN0 Gm6089-201ENSMUST00000197666 938 ntBASIC15.66■□□□□ 0.1
Atf6F6VAN0 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.66■□□□□ 0.1
Atf6F6VAN0 Gm6376-201ENSMUST00000209407 580 ntBASIC15.66■□□□□ 0.1
Atf6F6VAN0 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Atf6F6VAN0 Gm37500-201ENSMUST00000192059 1443 ntBASIC15.66■□□□□ 0.1
Atf6F6VAN0 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Atf6F6VAN0 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.66■□□□□ 0.1
Atf6F6VAN0 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Atf6F6VAN0 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Atf6F6VAN0 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
Atf6F6VAN0 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Atf6F6VAN0 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Atf6F6VAN0 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Atf6F6VAN0 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Atf6F6VAN0 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Atf6F6VAN0 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Atf6F6VAN0 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Atf6F6VAN0 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Atf6F6VAN0 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.65■□□□□ 0.1
Atf6F6VAN0 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Atf6F6VAN0 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.65■□□□□ 0.1
Atf6F6VAN0 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Atf6F6VAN0 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Atf6F6VAN0 Gm7153-201ENSMUST00000117092 455 ntBASIC15.65■□□□□ 0.1
Atf6F6VAN0 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.65■□□□□ 0.1
Atf6F6VAN0 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.65■□□□□ 0.1
Atf6F6VAN0 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Atf6F6VAN0 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Atf6F6VAN0 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Atf6F6VAN0 Rps4l-201ENSMUST00000071745 943 ntBASIC15.65■□□□□ 0.1
Atf6F6VAN0 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Atf6F6VAN0 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Atf6F6VAN0 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Atf6F6VAN0 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Atf6F6VAN0 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.65■□□□□ 0.1
Atf6F6VAN0 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms