Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col6a3E9PWQ3 Gm13342-201ENSMUST00000121055 207 ntBASIC15.03■□□□□ -0
Col6a3E9PWQ3 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC15.03■□□□□ -0
Col6a3E9PWQ3 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col6a3E9PWQ3 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
Col6a3E9PWQ3 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col6a3E9PWQ3 Gm6756-201ENSMUST00000180647 1620 ntBASIC15.03■□□□□ -0
Col6a3E9PWQ3 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Col6a3E9PWQ3 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Col6a3E9PWQ3 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col6a3E9PWQ3 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC15.03■□□□□ -0
Col6a3E9PWQ3 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC15.03■□□□□ -0
Col6a3E9PWQ3 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Col6a3E9PWQ3 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Col6a3E9PWQ3 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC15.02■□□□□ -0
Col6a3E9PWQ3 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Col6a3E9PWQ3 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col6a3E9PWQ3 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC15.02■□□□□ -0
Col6a3E9PWQ3 Gm5363-201ENSMUST00000211927 938 ntBASIC15.02■□□□□ -0
Col6a3E9PWQ3 CT573034.1-201ENSMUST00000222983 313 ntBASIC15.02■□□□□ -0
Col6a3E9PWQ3 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Col6a3E9PWQ3 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col6a3E9PWQ3 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Col6a3E9PWQ3 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col6a3E9PWQ3 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC15.02□□□□□ -0.01
Col6a3E9PWQ3 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col6a3E9PWQ3 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Col6a3E9PWQ3 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col6a3E9PWQ3 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col6a3E9PWQ3 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Col6a3E9PWQ3 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col6a3E9PWQ3 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.02□□□□□ -0.01
Col6a3E9PWQ3 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Col6a3E9PWQ3 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.02□□□□□ -0.01
Col6a3E9PWQ3 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Col6a3E9PWQ3 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC15.02□□□□□ -0.01
Col6a3E9PWQ3 Mir7654-201ENSMUST00000185082 70 ntBASIC15.02□□□□□ -0.01
Col6a3E9PWQ3 Rps4l-202ENSMUST00000204242 789 ntBASIC15.02□□□□□ -0.01
Col6a3E9PWQ3 Gm8463-201ENSMUST00000208573 613 ntBASIC15.02□□□□□ -0.01
Col6a3E9PWQ3 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col6a3E9PWQ3 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Col6a3E9PWQ3 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
Col6a3E9PWQ3 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Col6a3E9PWQ3 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a3E9PWQ3 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a3E9PWQ3 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a3E9PWQ3 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a3E9PWQ3 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC15.01□□□□□ -0.01
Col6a3E9PWQ3 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC15.01□□□□□ -0.01
Col6a3E9PWQ3 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a3E9PWQ3 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a3E9PWQ3 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a3E9PWQ3 Gm8775-201ENSMUST00000170943 1327 ntBASIC15.01□□□□□ -0.01
Col6a3E9PWQ3 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a3E9PWQ3 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.01□□□□□ -0.01
Col6a3E9PWQ3 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a3E9PWQ3 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a3E9PWQ3 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a3E9PWQ3 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a3E9PWQ3 Gm38341-201ENSMUST00000195357 515 ntBASIC15.01□□□□□ -0.01
Col6a3E9PWQ3 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a3E9PWQ3 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Col6a3E9PWQ3 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a3E9PWQ3 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.01□□□□□ -0.01
Col6a3E9PWQ3 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a3E9PWQ3 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col6a3E9PWQ3 Gm10012-201ENSMUST00000078252 192 ntBASIC15□□□□□ -0.01
Col6a3E9PWQ3 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col6a3E9PWQ3 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col6a3E9PWQ3 Gm9816-201ENSMUST00000122292 1414 ntBASIC15□□□□□ -0.01
Col6a3E9PWQ3 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Col6a3E9PWQ3 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC15□□□□□ -0.01
Col6a3E9PWQ3 Gm7895-201ENSMUST00000187459 1173 ntBASIC15□□□□□ -0.01
Col6a3E9PWQ3 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC15□□□□□ -0.01
Col6a3E9PWQ3 Gm9299-201ENSMUST00000206392 1140 ntBASIC15□□□□□ -0.01
Col6a3E9PWQ3 Gm40466-201ENSMUST00000212174 422 ntBASIC15□□□□□ -0.01
Col6a3E9PWQ3 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col6a3E9PWQ3 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col6a3E9PWQ3 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col6a3E9PWQ3 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col6a3E9PWQ3 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col6a3E9PWQ3 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col6a3E9PWQ3 Gm22323-201ENSMUST00000103832 109 ntBASIC15□□□□□ -0.01
Col6a3E9PWQ3 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC15□□□□□ -0.01
Col6a3E9PWQ3 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Col6a3E9PWQ3 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col6a3E9PWQ3 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col6a3E9PWQ3 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col6a3E9PWQ3 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col6a3E9PWQ3 Gm14722-201ENSMUST00000118943 689 ntBASIC14.99□□□□□ -0.01
Col6a3E9PWQ3 Gm24196-201ENSMUST00000179161 110 ntBASIC14.99□□□□□ -0.01
Col6a3E9PWQ3 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC14.99□□□□□ -0.01
Col6a3E9PWQ3 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC14.99□□□□□ -0.01
Col6a3E9PWQ3 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.99□□□□□ -0.01
Col6a3E9PWQ3 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col6a3E9PWQ3 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col6a3E9PWQ3 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col6a3E9PWQ3 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Col6a3E9PWQ3 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col6a3E9PWQ3 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms