Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Dchs1E9PVD3 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Dchs1E9PVD3 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
Dchs1E9PVD3 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Dchs1E9PVD3 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Dchs1E9PVD3 Gm14042-201ENSMUST00000120139 833 ntBASIC13.35□□□□□ -0.27
Dchs1E9PVD3 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Dchs1E9PVD3 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Dchs1E9PVD3 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.35□□□□□ -0.27
Dchs1E9PVD3 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.35□□□□□ -0.27
Dchs1E9PVD3 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Dchs1E9PVD3 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Dchs1E9PVD3 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.34□□□□□ -0.27
Dchs1E9PVD3 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Dchs1E9PVD3 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Dchs1E9PVD3 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Dchs1E9PVD3 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.34□□□□□ -0.27
Dchs1E9PVD3 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.34□□□□□ -0.27
Dchs1E9PVD3 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Dchs1E9PVD3 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Dchs1E9PVD3 Gm38225-201ENSMUST00000194001 393 ntBASIC13.34□□□□□ -0.27
Dchs1E9PVD3 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Dchs1E9PVD3 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Dchs1E9PVD3 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Dchs1E9PVD3 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Dchs1E9PVD3 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Dchs1E9PVD3 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Dchs1E9PVD3 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Dchs1E9PVD3 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.34□□□□□ -0.27
Dchs1E9PVD3 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.34□□□□□ -0.27
Dchs1E9PVD3 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Dchs1E9PVD3 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Dchs1E9PVD3 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Dchs1E9PVD3 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Dchs1E9PVD3 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Dchs1E9PVD3 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Dchs1E9PVD3 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.34□□□□□ -0.27
Dchs1E9PVD3 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Dchs1E9PVD3 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Dchs1E9PVD3 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.33□□□□□ -0.27
Dchs1E9PVD3 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Dchs1E9PVD3 Gm6266-201ENSMUST00000203844 806 ntBASIC13.33□□□□□ -0.27
Dchs1E9PVD3 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Dchs1E9PVD3 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Dchs1E9PVD3 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.33□□□□□ -0.28
Dchs1E9PVD3 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Dchs1E9PVD3 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Dchs1E9PVD3 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Dchs1E9PVD3 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Dchs1E9PVD3 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Dchs1E9PVD3 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Dchs1E9PVD3 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Dchs1E9PVD3 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Dchs1E9PVD3 Gm2272-201ENSMUST00000194903 582 ntBASIC13.33□□□□□ -0.28
Dchs1E9PVD3 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.33□□□□□ -0.28
Dchs1E9PVD3 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.33□□□□□ -0.28
Dchs1E9PVD3 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Dchs1E9PVD3 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Dchs1E9PVD3 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Dchs1E9PVD3 Gm42900-201ENSMUST00000197184 2167 ntBASIC13.33□□□□□ -0.28
Dchs1E9PVD3 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Dchs1E9PVD3 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Dchs1E9PVD3 Gm14767-201ENSMUST00000121559 586 ntBASIC13.33□□□□□ -0.28
Dchs1E9PVD3 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Dchs1E9PVD3 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.33□□□□□ -0.28
Dchs1E9PVD3 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC13.33□□□□□ -0.28
Dchs1E9PVD3 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Dchs1E9PVD3 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Dchs1E9PVD3 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Dchs1E9PVD3 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Dchs1E9PVD3 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Dchs1E9PVD3 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Dchs1E9PVD3 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Dchs1E9PVD3 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Dchs1E9PVD3 Gm9908-201ENSMUST00000211534 448 ntBASIC13.32□□□□□ -0.28
Dchs1E9PVD3 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Dchs1E9PVD3 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Dchs1E9PVD3 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Dchs1E9PVD3 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Dchs1E9PVD3 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Dchs1E9PVD3 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Dchs1E9PVD3 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Dchs1E9PVD3 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Dchs1E9PVD3 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Dchs1E9PVD3 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Dchs1E9PVD3 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Dchs1E9PVD3 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.32□□□□□ -0.28
Dchs1E9PVD3 Gm42612-201ENSMUST00000197986 623 ntBASIC13.32□□□□□ -0.28
Dchs1E9PVD3 Gm43170-201ENSMUST00000199827 612 ntBASIC13.32□□□□□ -0.28
Dchs1E9PVD3 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.32□□□□□ -0.28
Dchs1E9PVD3 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.32□□□□□ -0.28
Dchs1E9PVD3 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Dchs1E9PVD3 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Dchs1E9PVD3 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Dchs1E9PVD3 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Dchs1E9PVD3 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Dchs1E9PVD3 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.32□□□□□ -0.28
Dchs1E9PVD3 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Dchs1E9PVD3 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Dchs1E9PVD3 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms