Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Gm9899-201ENSMUST00000065519 555 ntBASIC21.15■□□□□ 0.98
Hfm1D3Z4R1 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Hfm1D3Z4R1 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hfm1D3Z4R1 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hfm1D3Z4R1 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hfm1D3Z4R1 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hfm1D3Z4R1 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hfm1D3Z4R1 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hfm1D3Z4R1 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Hfm1D3Z4R1 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Hfm1D3Z4R1 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC21.14■□□□□ 0.98
Hfm1D3Z4R1 Gm7390-201ENSMUST00000212452 1216 ntBASIC21.14■□□□□ 0.98
Hfm1D3Z4R1 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC21.14■□□□□ 0.98
Hfm1D3Z4R1 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Hfm1D3Z4R1 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Hfm1D3Z4R1 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC21.14■□□□□ 0.98
Hfm1D3Z4R1 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Hfm1D3Z4R1 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Hfm1D3Z4R1 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hfm1D3Z4R1 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Hfm1D3Z4R1 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hfm1D3Z4R1 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hfm1D3Z4R1 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hfm1D3Z4R1 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Hfm1D3Z4R1 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hfm1D3Z4R1 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC21.13■□□□□ 0.97
Hfm1D3Z4R1 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hfm1D3Z4R1 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hfm1D3Z4R1 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Hfm1D3Z4R1 Gm10766-202ENSMUST00000194123 606 ntBASIC21.13■□□□□ 0.97
Hfm1D3Z4R1 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Hfm1D3Z4R1 Gm9229-201ENSMUST00000222777 126 ntBASIC21.13■□□□□ 0.97
Hfm1D3Z4R1 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hfm1D3Z4R1 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Hfm1D3Z4R1 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hfm1D3Z4R1 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Hfm1D3Z4R1 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hfm1D3Z4R1 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hfm1D3Z4R1 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hfm1D3Z4R1 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Hfm1D3Z4R1 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hfm1D3Z4R1 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hfm1D3Z4R1 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hfm1D3Z4R1 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hfm1D3Z4R1 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hfm1D3Z4R1 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Hfm1D3Z4R1 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Hfm1D3Z4R1 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hfm1D3Z4R1 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hfm1D3Z4R1 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hfm1D3Z4R1 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hfm1D3Z4R1 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Hfm1D3Z4R1 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hfm1D3Z4R1 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hfm1D3Z4R1 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Hfm1D3Z4R1 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hfm1D3Z4R1 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Hfm1D3Z4R1 Gm4691-201ENSMUST00000182339 1000 ntBASIC21.12■□□□□ 0.97
Hfm1D3Z4R1 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC21.12■□□□□ 0.97
Hfm1D3Z4R1 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC21.12■□□□□ 0.97
Hfm1D3Z4R1 Gm2451-201ENSMUST00000199447 999 ntBASIC21.12■□□□□ 0.97
Hfm1D3Z4R1 Gm10290-201ENSMUST00000200451 999 ntBASIC21.12■□□□□ 0.97
Hfm1D3Z4R1 Gm45098-201ENSMUST00000207179 657 ntBASIC21.12■□□□□ 0.97
Hfm1D3Z4R1 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hfm1D3Z4R1 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hfm1D3Z4R1 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hfm1D3Z4R1 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hfm1D3Z4R1 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Hfm1D3Z4R1 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Hfm1D3Z4R1 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hfm1D3Z4R1 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hfm1D3Z4R1 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hfm1D3Z4R1 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hfm1D3Z4R1 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hfm1D3Z4R1 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC21.12■□□□□ 0.97
Hfm1D3Z4R1 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC21.12■□□□□ 0.97
Hfm1D3Z4R1 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Hfm1D3Z4R1 Gm6266-201ENSMUST00000203844 806 ntBASIC21.12■□□□□ 0.97
Hfm1D3Z4R1 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC21.12■□□□□ 0.97
Hfm1D3Z4R1 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hfm1D3Z4R1 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hfm1D3Z4R1 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Hfm1D3Z4R1 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hfm1D3Z4R1 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
Hfm1D3Z4R1 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hfm1D3Z4R1 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hfm1D3Z4R1 Gm13464-201ENSMUST00000119418 935 ntBASIC21.11■□□□□ 0.97
Hfm1D3Z4R1 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hfm1D3Z4R1 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Hfm1D3Z4R1 AC153962.4-201ENSMUST00000217878 242 ntBASIC21.11■□□□□ 0.97
Hfm1D3Z4R1 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hfm1D3Z4R1 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hfm1D3Z4R1 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Hfm1D3Z4R1 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hfm1D3Z4R1 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hfm1D3Z4R1 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hfm1D3Z4R1 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC21.1■□□□□ 0.97
Hfm1D3Z4R1 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Hfm1D3Z4R1 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hfm1D3Z4R1 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms