Protein–RNA interactions for Protein: D3Z3K2

Ccnb1ip1, E3 ubiquitin-protein ligase CCNB1IP1, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccnb1ip1D3Z3K2 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccnb1ip1D3Z3K2 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccnb1ip1D3Z3K2 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccnb1ip1D3Z3K2 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ccnb1ip1D3Z3K2 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccnb1ip1D3Z3K2 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ccnb1ip1D3Z3K2 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccnb1ip1D3Z3K2 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccnb1ip1D3Z3K2 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Ccnb1ip1D3Z3K2 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccnb1ip1D3Z3K2 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccnb1ip1D3Z3K2 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Ccnb1ip1D3Z3K2 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ccnb1ip1D3Z3K2 Gm12008-201ENSMUST00000117791 755 ntBASIC13.83□□□□□ -0.2
Ccnb1ip1D3Z3K2 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ccnb1ip1D3Z3K2 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC13.83□□□□□ -0.2
Ccnb1ip1D3Z3K2 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccnb1ip1D3Z3K2 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccnb1ip1D3Z3K2 Gm7367-201ENSMUST00000057611 492 ntBASIC13.83□□□□□ -0.2
Ccnb1ip1D3Z3K2 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccnb1ip1D3Z3K2 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Ccnb1ip1D3Z3K2 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccnb1ip1D3Z3K2 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ccnb1ip1D3Z3K2 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccnb1ip1D3Z3K2 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
Ccnb1ip1D3Z3K2 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccnb1ip1D3Z3K2 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccnb1ip1D3Z3K2 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccnb1ip1D3Z3K2 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccnb1ip1D3Z3K2 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.83□□□□□ -0.2
Ccnb1ip1D3Z3K2 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccnb1ip1D3Z3K2 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Ccnb1ip1D3Z3K2 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ccnb1ip1D3Z3K2 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccnb1ip1D3Z3K2 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccnb1ip1D3Z3K2 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccnb1ip1D3Z3K2 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Ccnb1ip1D3Z3K2 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccnb1ip1D3Z3K2 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccnb1ip1D3Z3K2 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccnb1ip1D3Z3K2 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccnb1ip1D3Z3K2 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccnb1ip1D3Z3K2 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccnb1ip1D3Z3K2 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.82□□□□□ -0.2
Ccnb1ip1D3Z3K2 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccnb1ip1D3Z3K2 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccnb1ip1D3Z3K2 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccnb1ip1D3Z3K2 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Ccnb1ip1D3Z3K2 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccnb1ip1D3Z3K2 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccnb1ip1D3Z3K2 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccnb1ip1D3Z3K2 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccnb1ip1D3Z3K2 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ccnb1ip1D3Z3K2 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccnb1ip1D3Z3K2 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccnb1ip1D3Z3K2 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.82□□□□□ -0.2
Ccnb1ip1D3Z3K2 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ccnb1ip1D3Z3K2 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccnb1ip1D3Z3K2 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccnb1ip1D3Z3K2 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccnb1ip1D3Z3K2 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccnb1ip1D3Z3K2 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccnb1ip1D3Z3K2 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Ccnb1ip1D3Z3K2 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Ccnb1ip1D3Z3K2 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccnb1ip1D3Z3K2 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccnb1ip1D3Z3K2 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.81□□□□□ -0.2
Ccnb1ip1D3Z3K2 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Ccnb1ip1D3Z3K2 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
Ccnb1ip1D3Z3K2 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccnb1ip1D3Z3K2 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccnb1ip1D3Z3K2 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccnb1ip1D3Z3K2 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccnb1ip1D3Z3K2 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccnb1ip1D3Z3K2 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccnb1ip1D3Z3K2 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccnb1ip1D3Z3K2 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC13.81□□□□□ -0.2
Ccnb1ip1D3Z3K2 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccnb1ip1D3Z3K2 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccnb1ip1D3Z3K2 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccnb1ip1D3Z3K2 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccnb1ip1D3Z3K2 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccnb1ip1D3Z3K2 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC13.81□□□□□ -0.2
Ccnb1ip1D3Z3K2 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ccnb1ip1D3Z3K2 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
Ccnb1ip1D3Z3K2 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccnb1ip1D3Z3K2 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
Ccnb1ip1D3Z3K2 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Ccnb1ip1D3Z3K2 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccnb1ip1D3Z3K2 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccnb1ip1D3Z3K2 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccnb1ip1D3Z3K2 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ccnb1ip1D3Z3K2 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Ccnb1ip1D3Z3K2 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccnb1ip1D3Z3K2 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccnb1ip1D3Z3K2 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccnb1ip1D3Z3K2 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccnb1ip1D3Z3K2 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccnb1ip1D3Z3K2 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccnb1ip1D3Z3K2 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms