Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm3543D3Z235 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm3543D3Z235 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm3543D3Z235 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.81□□□□□ -0.2
Gm3543D3Z235 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Gm3543D3Z235 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm3543D3Z235 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Gm3543D3Z235 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm3543D3Z235 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm3543D3Z235 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm3543D3Z235 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Gm3543D3Z235 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm3543D3Z235 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Gm3543D3Z235 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm3543D3Z235 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm3543D3Z235 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm3543D3Z235 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm3543D3Z235 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm3543D3Z235 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm3543D3Z235 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Gm3543D3Z235 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm3543D3Z235 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Gm3543D3Z235 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm3543D3Z235 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm3543D3Z235 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm3543D3Z235 Gm6184-201ENSMUST00000120403 1261 ntBASIC13.8□□□□□ -0.2
Gm3543D3Z235 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm3543D3Z235 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13.8□□□□□ -0.2
Gm3543D3Z235 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.8□□□□□ -0.2
Gm3543D3Z235 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm3543D3Z235 Gm19164-201ENSMUST00000210667 640 ntBASIC13.8□□□□□ -0.2
Gm3543D3Z235 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm3543D3Z235 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.8□□□□□ -0.2
Gm3543D3Z235 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm3543D3Z235 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm3543D3Z235 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm3543D3Z235 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.8□□□□□ -0.2
Gm3543D3Z235 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Gm3543D3Z235 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Gm3543D3Z235 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Gm3543D3Z235 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.8□□□□□ -0.2
Gm3543D3Z235 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Gm3543D3Z235 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Gm3543D3Z235 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.8□□□□□ -0.2
Gm3543D3Z235 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm3543D3Z235 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Gm3543D3Z235 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Gm3543D3Z235 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Gm3543D3Z235 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm3543D3Z235 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm3543D3Z235 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.79□□□□□ -0.2
Gm3543D3Z235 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.79□□□□□ -0.2
Gm3543D3Z235 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm3543D3Z235 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Gm3543D3Z235 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.79□□□□□ -0.2
Gm3543D3Z235 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm3543D3Z235 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.79□□□□□ -0.2
Gm3543D3Z235 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Gm3543D3Z235 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm3543D3Z235 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm3543D3Z235 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Gm3543D3Z235 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Gm3543D3Z235 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Gm3543D3Z235 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm3543D3Z235 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Gm3543D3Z235 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm3543D3Z235 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm3543D3Z235 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm3543D3Z235 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm3543D3Z235 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm3543D3Z235 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm3543D3Z235 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm3543D3Z235 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13.78□□□□□ -0.2
Gm3543D3Z235 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC13.78□□□□□ -0.2
Gm3543D3Z235 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.78□□□□□ -0.2
Gm3543D3Z235 Gm13036-201ENSMUST00000117799 748 ntBASIC13.78□□□□□ -0.2
Gm3543D3Z235 Gm11764-201ENSMUST00000120221 623 ntBASIC13.78□□□□□ -0.2
Gm3543D3Z235 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.78□□□□□ -0.2
Gm3543D3Z235 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC13.78□□□□□ -0.2
Gm3543D3Z235 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.78□□□□□ -0.2
Gm3543D3Z235 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm3543D3Z235 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm3543D3Z235 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Gm3543D3Z235 Gm27646-201ENSMUST00000183989 110 ntBASIC13.78□□□□□ -0.2
Gm3543D3Z235 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm3543D3Z235 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.78□□□□□ -0.2
Gm3543D3Z235 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm3543D3Z235 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm3543D3Z235 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm3543D3Z235 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm3543D3Z235 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Gm3543D3Z235 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Gm3543D3Z235 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm3543D3Z235 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
Gm3543D3Z235 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Gm3543D3Z235 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Gm3543D3Z235 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm3543D3Z235 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm3543D3Z235 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Gm3543D3Z235 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms