Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Trim30cD3YVI9 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim30cD3YVI9 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim30cD3YVI9 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim30cD3YVI9 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.68■□□□□ 0.26
Trim30cD3YVI9 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.68■□□□□ 0.26
Trim30cD3YVI9 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim30cD3YVI9 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.68■□□□□ 0.26
Trim30cD3YVI9 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim30cD3YVI9 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim30cD3YVI9 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim30cD3YVI9 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.68■□□□□ 0.26
Trim30cD3YVI9 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim30cD3YVI9 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Trim30cD3YVI9 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim30cD3YVI9 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim30cD3YVI9 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Trim30cD3YVI9 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
Trim30cD3YVI9 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Trim30cD3YVI9 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Trim30cD3YVI9 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim30cD3YVI9 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim30cD3YVI9 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim30cD3YVI9 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim30cD3YVI9 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim30cD3YVI9 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Trim30cD3YVI9 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim30cD3YVI9 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim30cD3YVI9 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim30cD3YVI9 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trim30cD3YVI9 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim30cD3YVI9 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim30cD3YVI9 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim30cD3YVI9 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim30cD3YVI9 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim30cD3YVI9 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim30cD3YVI9 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim30cD3YVI9 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.67■□□□□ 0.26
Trim30cD3YVI9 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim30cD3YVI9 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC16.67■□□□□ 0.26
Trim30cD3YVI9 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trim30cD3YVI9 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim30cD3YVI9 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim30cD3YVI9 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim30cD3YVI9 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Trim30cD3YVI9 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim30cD3YVI9 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim30cD3YVI9 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Trim30cD3YVI9 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim30cD3YVI9 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim30cD3YVI9 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim30cD3YVI9 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim30cD3YVI9 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim30cD3YVI9 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim30cD3YVI9 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim30cD3YVI9 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim30cD3YVI9 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.66■□□□□ 0.26
Trim30cD3YVI9 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim30cD3YVI9 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim30cD3YVI9 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim30cD3YVI9 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim30cD3YVI9 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.66■□□□□ 0.26
Trim30cD3YVI9 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim30cD3YVI9 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
Trim30cD3YVI9 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim30cD3YVI9 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Trim30cD3YVI9 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim30cD3YVI9 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Trim30cD3YVI9 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim30cD3YVI9 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim30cD3YVI9 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim30cD3YVI9 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim30cD3YVI9 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
Trim30cD3YVI9 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim30cD3YVI9 Ap5m1-205ENSMUST00000227431 3757 ntBASIC16.66■□□□□ 0.26
Trim30cD3YVI9 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim30cD3YVI9 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim30cD3YVI9 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim30cD3YVI9 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC16.66■□□□□ 0.26
Trim30cD3YVI9 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim30cD3YVI9 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.66■□□□□ 0.26
Trim30cD3YVI9 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim30cD3YVI9 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim30cD3YVI9 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim30cD3YVI9 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim30cD3YVI9 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim30cD3YVI9 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.66■□□□□ 0.26
Trim30cD3YVI9 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim30cD3YVI9 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim30cD3YVI9 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim30cD3YVI9 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.65■□□□□ 0.26
Trim30cD3YVI9 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim30cD3YVI9 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim30cD3YVI9 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim30cD3YVI9 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim30cD3YVI9 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim30cD3YVI9 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Trim30cD3YVI9 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.65■□□□□ 0.26
Trim30cD3YVI9 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.65■□□□□ 0.26
Trim30cD3YVI9 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms