Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.6■□□□□ 0.41
Clrn2B2RVW2 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clrn2B2RVW2 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clrn2B2RVW2 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Clrn2B2RVW2 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clrn2B2RVW2 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clrn2B2RVW2 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clrn2B2RVW2 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Clrn2B2RVW2 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Clrn2B2RVW2 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clrn2B2RVW2 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC17.59■□□□□ 0.41
Clrn2B2RVW2 Gm23547-201ENSMUST00000158210 271 ntBASIC17.59■□□□□ 0.41
Clrn2B2RVW2 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC17.59■□□□□ 0.41
Clrn2B2RVW2 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Clrn2B2RVW2 Gm6888-201ENSMUST00000221983 706 ntBASIC17.59■□□□□ 0.41
Clrn2B2RVW2 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC17.59■□□□□ 0.41
Clrn2B2RVW2 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clrn2B2RVW2 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clrn2B2RVW2 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clrn2B2RVW2 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clrn2B2RVW2 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clrn2B2RVW2 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clrn2B2RVW2 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clrn2B2RVW2 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.59■□□□□ 0.41
Clrn2B2RVW2 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Clrn2B2RVW2 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clrn2B2RVW2 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Clrn2B2RVW2 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Clrn2B2RVW2 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Clrn2B2RVW2 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Clrn2B2RVW2 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clrn2B2RVW2 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Clrn2B2RVW2 Gm13015-201ENSMUST00000118674 204 ntBASIC17.58■□□□□ 0.4
Clrn2B2RVW2 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC17.58■□□□□ 0.4
Clrn2B2RVW2 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC17.58■□□□□ 0.4
Clrn2B2RVW2 Gm18737-201ENSMUST00000173594 937 ntBASIC17.58■□□□□ 0.4
Clrn2B2RVW2 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC17.58■□□□□ 0.4
Clrn2B2RVW2 Gm5866-201ENSMUST00000177881 973 ntBASIC17.58■□□□□ 0.4
Clrn2B2RVW2 Gm27989-201ENSMUST00000184721 107 ntBASIC17.58■□□□□ 0.4
Clrn2B2RVW2 Gm8597-201ENSMUST00000191525 1109 ntBASIC17.58■□□□□ 0.4
Clrn2B2RVW2 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Clrn2B2RVW2 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC17.58■□□□□ 0.4
Clrn2B2RVW2 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC17.58■□□□□ 0.4
Clrn2B2RVW2 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clrn2B2RVW2 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clrn2B2RVW2 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Clrn2B2RVW2 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC17.58■□□□□ 0.4
Clrn2B2RVW2 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Clrn2B2RVW2 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Clrn2B2RVW2 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clrn2B2RVW2 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.58■□□□□ 0.4
Clrn2B2RVW2 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clrn2B2RVW2 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clrn2B2RVW2 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Clrn2B2RVW2 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clrn2B2RVW2 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clrn2B2RVW2 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC17.57■□□□□ 0.4
Clrn2B2RVW2 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Clrn2B2RVW2 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.57■□□□□ 0.4
Clrn2B2RVW2 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clrn2B2RVW2 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clrn2B2RVW2 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clrn2B2RVW2 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Clrn2B2RVW2 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clrn2B2RVW2 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Clrn2B2RVW2 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC17.57■□□□□ 0.4
Clrn2B2RVW2 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Clrn2B2RVW2 Gm7556-201ENSMUST00000201178 1084 ntBASIC17.57■□□□□ 0.4
Clrn2B2RVW2 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC17.57■□□□□ 0.4
Clrn2B2RVW2 CT009510.1-201ENSMUST00000227972 270 ntBASIC17.57■□□□□ 0.4
Clrn2B2RVW2 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clrn2B2RVW2 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clrn2B2RVW2 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Clrn2B2RVW2 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clrn2B2RVW2 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clrn2B2RVW2 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Clrn2B2RVW2 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clrn2B2RVW2 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clrn2B2RVW2 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Clrn2B2RVW2 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Clrn2B2RVW2 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Clrn2B2RVW2 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clrn2B2RVW2 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clrn2B2RVW2 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clrn2B2RVW2 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC17.56■□□□□ 0.4
Clrn2B2RVW2 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC17.56■□□□□ 0.4
Clrn2B2RVW2 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC17.56■□□□□ 0.4
Clrn2B2RVW2 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clrn2B2RVW2 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clrn2B2RVW2 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clrn2B2RVW2 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clrn2B2RVW2 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Clrn2B2RVW2 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Clrn2B2RVW2 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC17.56■□□□□ 0.4
Clrn2B2RVW2 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Clrn2B2RVW2 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Clrn2B2RVW2 Gm29541-201ENSMUST00000191351 678 ntBASIC17.56■□□□□ 0.4
Clrn2B2RVW2 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clrn2B2RVW2 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clrn2B2RVW2 Gm2423-201ENSMUST00000074863 733 ntBASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms